Rattus norvegicus (rat): 59319
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Entry
59319 CDS
T01003
Symbol
Ambra1
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04137
Mitophagy - animal
rno04140
Autophagy - animal
rno05010
Alzheimer disease
rno05014
Amyotrophic lateral sclerosis
rno05016
Huntington disease
rno05017
Spinocerebellar ataxia
rno05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
59319 (Ambra1)
04137 Mitophagy - animal
59319 (Ambra1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
59319 (Ambra1)
05014 Amyotrophic lateral sclerosis
59319 (Ambra1)
05016 Huntington disease
59319 (Ambra1)
05017 Spinocerebellar ataxia
59319 (Ambra1)
05022 Pathways of neurodegeneration - multiple diseases
59319 (Ambra1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
59319 (Ambra1)
03029 Mitochondrial biogenesis [BR:
rno03029
]
59319 (Ambra1)
Membrane trafficking [BR:
rno04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
59319 (Ambra1)
Mitochondrial biogenesis [BR:
rno03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
59319 (Ambra1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
Acyl_CoA_thio
Motif
Other DBs
NCBI-GeneID:
59319
NCBI-ProteinID:
NP_001127813
RGD:
621330
Ensembl:
ENSRNOG00000017422
UniProt:
F1LNQ2
A6HNE5
LinkDB
All DBs
Position
3:98156626..98345876
Genome browser
AA seq
1300 aa
AA seq
DB search
MKVVPEKNAVRILWGRERGTRAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPRSTFLLA
FSPDRTLLASTHVNHNIYITEVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEV
RIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEM
ERVRLVRFDPLGHYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLL
HNFLHMLSSRSSGIQVGEQSTVQDSATPSPPPPPPQPSTERPRTSAYIRLRQRVSYPTTV
ECCQHPGILCLCSRCAGTRVPSLLPHQDSVPPASARATTPSFSFVQTEPFHPPEQASSTQ
QDQGLLNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLGGPLSSHPSRYHRELAPGLTGSEW
TRTVLTLNSRSEVESMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGFPSSGLAT
ESDGGNGSSQNNSGNIRHELQCDLRRFFLEYDRLQELDQSLSGETPQTQQAQEMLNNNIE
SERPGPSHQPTPHSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERTTPNYSSGEASSS
WHVSTTFEGMPPSGNQLPPLERTEGQMPNSSRLELSSSASSQEERTVGVAFNQETGHWER
IYTQSSRSGTVSQEALHQDMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIYPDPA
RLSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRLRSSTSSSSSDNQGPSVEGTDLEFEDF
EDNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVNRVL
AGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCDISA
DGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVG
LASRRILLHPSTEHMVAQVFRLQQAHGGETSMRRVFNVLYPMPADQRRHVSINSARWLPE
PGLGLAYGTNKGDLVICRPEALNSGIEYYWDQLNETVFTVHSSSRSSERPGTSRATWRTD
RDMGLMNAIGLQPRNPTTSVTSQGTQTLALQLQNAETQTEREEEEPGTASSGPGEGEGSE
YGGSGEDALSRIQRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGTESG
AARTSSPQPSTSRGLLSEPGQLAERGLSPRTASWDQPSTSGRELPQPALSSSSPVPIPVP
LASNEGPTMHCNVTNNSHLPEGDSSNVGEAAGPSGEPRNR
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgtcccagagaagaatgctgtacgaatcctctggggccgagagcggggcact
cgtgccatgggtgcccagcggcttctgcaggagctggtggaggataagactcgatggatg
aaatgggagggcaagagagtagaacttcctgatagtccacgctcgaccttcttactggcc
ttcagcccagacaggactctcttggcgtccacacatgtgaaccataacatctatattaca
gaggttaagactggcaagtgtgttcactctctgattggacaccgccgtactccatggtgt
gtcacttttcatcccactatctcaggccttattgcttctggctgcctagatggggaagtt
aggatttgggacttacatggtggcagtgaaagctggttcacagatagcaacaatgccata
gcttctttggctttccaccctacggctcagctcctgctgatcgccactgcaaatgagatc
catttctgggattggagtcgtcgggaaccctttgctgtggtgaaaacagctagtgagatg
gagcgtgttcgtctggtgagatttgatccacttggacactacttacttacagctattgtt
aacccctctaatcagcagggtgatgatgaaccagaaatccctatagatggaacagaatta
tctcattaccgtcagcgtgccctcctgcaatcacagccagttcgccggacacccctcctc
cacaatttcctgcatatgctgtcctcccgctcctctggcatccaggtgggagagcaaagc
acagtacaagattctgctaccccctcacccccaccgcctccccctcagccctccacggag
cgtcccaggacttccgcttacatcagactccgacagcgggtcagttaccccaccacagtt
gagtgctgccagcaccctgggatcctgtgcctttgcagccgttgtgctggcactcgagtt
ccttccctcttgccacaccaggacagtgtcccccctgcttctgccagagctactacccct
tccttttcttttgtacagaccgagcccttccatcccccggagcaggcttcatcaacgcag
caggaccaaggcctcctgaaccggccgtctgccttcagtacagtccagagcagcactgcg
ggcaacacgctccgcaacctcagtctgggtcctacccgtcgctctttggggggcccactg
tccagccacccatctaggtatcacagagaactagcccctgggctgacaggttctgagtgg
acccggacagtactcactctgaactcacgttctgaggtagaatctatgcccccaccgagg
accagtgcctcctcagtgagtttgctttctgtactgagacagcaggaaggtggctctcag
gcatctgtgtatacttcagccacagaagggaggggttttccatcatcagggttggcaact
gagtcagatggagggaatggttccagccaaaacaactcaggcaacattcgccatgagctt
cagtgtgacctgagacgcttttttttggagtatgacaggctgcaggagctggatcagagc
ctgagtggggaaactccccagacccaacaggcccaggaaatgctcaacaataatattgaa
tctgagagaccaggtccttcccatcagcctaccccacacagcagtgagaacaactccaac
ctttctcggggccaccttaatcgatgccgtgcttgccataatcttctaaccttcaacaat
gatacccttcgttgggaaagaaccacacctaactactcatccggtgaggctagctcttcc
tggcatgtctccactacttttgagggcatgccaccgagtggcaaccaactaccacctctt
gagcggactgagggccaaatgcctaactccagcaggctggagttgagcagttctgctagt
tcacaagaggagaggactgtgggggtggcctttaaccaggagaccggccattgggaacga
atttatacccagtccagcagatctggaactgtatcacaggaggccttacatcaagatatg
cctgaggaaagctctgaggaagactccctgaggaggaggctgctggagtcttccctcatt
tcattatcccgttatgatggagcaggatccagagagcacccaatttacccagacccagcg
agattatctcctgctgcatactacgcccagaggatgatccagtatctctcaaggagagac
agtattcgccagcgctccatgcgctaccaacagaatcggcttcgttcttccacctcctct
tcttcctcagacaaccagggtccatcagtagagggaaccgacttggaatttgaggacttt
gaggacaatggtgacagatctaggcaccgagctccccgaaatgcccgaatgtctgcacca
tcacttggacgctttgtcccaaggcgttttttgctgcctgagtacttgccttatgctggg
atttttcatgagcgtggacagcctggcttggctactcattcttctgttaacagggtcctg
gcaggggcagtaattggagatggacagtctgctgtggccagtaacattgccaatactacc
tacaggctccagtggtgggacttcaccaagtttgaccttccagaaatcagtaatgcctcc
gtgaatgtcctggtacagaactgcaagatctacaatgatgccagctgtgacatttctgca
gatggccagctcctggcagctttcatcccgagtagccagaggggctttcctgatgaaggc
atcctggcagtgtattccctggccccccataacttgggggaaatgctctacaccaagcga
tttggtcccaatgccatttctgtaagcctgtccccaatgggccgatacgttatggtgggc
ttggcctcacgaaggatcctgctgcacccctctacagagcacatggtagcccaggtcttc
aggctgcagcaggcccatggtggtgagacttccatgaggagagttttcaacgtcctttac
cccatgcctgcggaccagcggagacacgtcagcatcaactctgcccgctggctacctgag
ccagggctcggtttggcctatggcaccaacaaaggagacctggtgatctgccgaccagag
gccttaaactctggcattgagtactactgggaccagctaaatgaaacggtcttcactgtc
cactcaagtagcaggagcagcgagcggcctggaaccagcagagccacatggcggacagac
agagacatgggcttgatgaatgcaattgggctgcaacctcggaaccctaccacctctgtg
acatctcagggcacccagactctggccctccagttgcagaatgctgaaacacagactgag
agggaggaagaggaaccagggacagcatcctcaggtcctggtgaaggcgagggctcggaa
tatggtggcagtggggaagatgccctcagccggatccagaggctaatggccgagggtggc
atgacagctgtggtacagcgagaacagagtaccaccatggcctccatgggtggcttcggc
aacaacatcatcgttagccaccgcattcaccgcagctcccagacaggcacagagtcaggg
gctgctcgtacctcctcaccccagccctccacctctcgaggactactctcagaacctggg
caactggcagagcgaggactaagcccccggacagcctcctgggaccagcctagtacctct
ggaagggaactaccccagccagccctgtcctcttcctcccctgtccccattccagtcccc
cttgccagcaatgagggaccaaccatgcactgcaatgtgaccaataacagtcaccttcct
gagggtgatagtagcaatgtgggggaagctgcaggccctagtggggagccacggaaccga
tag
DBGET
integrated database retrieval system
