Rhodococcus opacus PD630: Pd630_LPD06227
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Entry
Pd630_LPD06227 CDS
T03071
Name
(GenBank) Porphyrin biosynthesis protein hemD
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
roa
Rhodococcus opacus PD630
Pathway
roa00860
Porphyrin metabolism
roa01100
Metabolic pathways
roa01110
Biosynthesis of secondary metabolites
roa01120
Microbial metabolism in diverse environments
roa01240
Biosynthesis of cofactors
Module
roa_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
roa_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
roa_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Pd630_LPD06227
Enzymes [BR:
roa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
Pd630_LPD06227
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
Pd630_LPD06227
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
AHK33414
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Position
complement(6442967..6444532)
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AA seq
521 aa
AA seq
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MSRVRKNTPGRILFVGSGPGDPALLTVHARDVLAAATLAFTDPDVDKGVTVLVGTDLGVD
AETGEPLAEVRPALGEPAEVAKTLVHEARNGHDVVRLVSGDPLTTDSVIAEVTAVARTQV
QFEVLPGLPSASAVPSYAGMALGSGHTEADVRGEVDWAALAAAPGPLVLHATSGHLAETA
SALVEHGLAPQTPAAITVRGTTRQQRTVEATLATLNEAGSELVGSLVVTVGKVVAQRNKM
SWWESRALYGWKVLVPRTKDQAGEMSDRLVTHGAIPIEVPTIAVEPPRSPAQMERSVKGL
VDGRYQWVVFTSTNAVRAVWEKFEEFGLDARAFSGVKIACIGEATAAKVRSFGINPELVP
SGEQSSEGLLAEFAPYDDVFDPVNRVLLPRADIATETLAEGLRERGWEIDDVTAYRTVRA
APPPAETREMIKTGGFDAVCFTSSSTVRNLVGIAGKPHARTLVACIGPKTAETAIEFGLR
VDVQPETAQVGPLVEALAEHAARLRAEGALPPPRKKSRARR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagccgagtccgtaagaacacccccggacgaatcctgttcgtgggatccggaccgggc
gatccggcactgctcaccgtgcacgcacgggacgtccttgccgcagcgaccctcgccttc
accgaccccgacgtcgacaagggcgtcacggtcctggtgggcaccgacctgggcgtcgac
gccgagaccggtgagccgctcgccgaggtccgtcccgcactgggtgagccggcggaggtc
gcgaagaccctcgtccacgaggcgagaaacggccacgacgtcgtgcgtctggtgtccggc
gacccgctgaccaccgactccgtgatcgccgaggtcaccgccgtcgcccgcacccaggtg
cagttcgaggtcctgccgggcctgccgtccgcgtccgccgtcccgtcctacgccggtatg
gcactggggtcgggacacaccgaggccgacgtccgcggcgaggtcgactgggctgccctg
gccgccgcacccggaccgctggtcctgcatgccacgtcgggtcatctcgccgagacggcg
agcgccctcgtcgagcacggcctggctccgcagactccggccgccatcacggttcgcggc
accacccggcagcagcgcaccgtggaggcaaccctcgcgacgctgaacgaggccggttcc
gaactggtcggttcgctggtcgtgacggtcggcaaggtcgtcgcccagcgcaacaagatg
tcctggtgggagtcgcgcgcactgtacggctggaaggtcctggtgccgcgcaccaaggat
caggcaggcgaaatgagcgaccgtctcgtcacgcacggcgccatcccgatcgaggtgccc
accatcgccgtcgagccgccccgcagcccggcgcagatggagcggtccgtgaagggcctc
gtcgacggccggtaccagtgggtggtcttcacgtccaccaacgcggtgcgtgcggtgtgg
gagaagttcgaggagttcgggctcgacgcccgcgcgttctccggcgtcaagatcgcctgc
atcggtgaggccacggccgccaaggtgcgctcgttcggaatcaaccctgaactcgtgccc
tccggtgagcagtcgagcgaaggcctgctggccgaattcgccccgtacgacgacgtgttc
gacccggtcaaccgggttctgctgccccgcgccgacatcgccaccgagacgctggccgag
ggcctgcgcgaacgtggctgggaaatcgacgacgtcacggcgtaccgcaccgtccgggct
gcgccgccgccggccgagacccgcgagatgatcaagaccggtgggttcgacgccgtctgc
ttcacctcgtcctcgaccgtccgcaatctcgtcggcatcgccggaaagccgcacgcgcgc
accctcgttgcctgcatcggtccgaagaccgccgagacggccatcgagttcggcctgcgc
gtggacgtacagccggagaccgctcaggtcggcccgctggtggaggctctcgccgagcac
gccgcgcgtctgcgtgccgagggtgcactgcccccgccgcgcaagaagtcccgcgctcgg
cgatag
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