Rhodococcus opacus PD630: Pd630_LPD06975
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Entry
Pd630_LPD06975 CDS
T03071
Name
(GenBank) putative HTH-type transcriptional regulator ycfQ
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
roa
Rhodococcus opacus PD630
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
roa03000
]
Pd630_LPD06975
Transcription factors [BR:
roa03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Pd630_LPD06975
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Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_30
TetR_C_15
Motif
Other DBs
NCBI-ProteinID:
AHK34160
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All DBs
Position
7233982..7234575
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AA seq
197 aa
AA seq
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MPRTQDFDTAEVVGRARDLFWDKGFEATSIPDLERVTGLNRSSLYNAFTSKRGLFDAAVH
DYLDRVVRPRLRILTDEPTRPDAAERYYRSLADALASLPDETPGRGCLLLNSAAGFAAHD
DTQRSVVDAYQRELSGALAHALRAHDPDASTTTLAHRTRLLTSLSVSALLLSRVNRDEAV
AVANTAVEQLEEWRPTS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcacgcaggatttcgacacggccgaagtggtcggccgcgcccgcgacctgttc
tgggacaagggcttcgaagccacgtcgatacccgacctcgaacgcgtcaccggactgaat
cgatcgagcctgtacaacgcgttcaccagcaaacgcgggctcttcgacgccgcggtgcac
gactacctggaccgggtggttcgcccccggctccgcatcctgaccgacgagccgacccgc
cccgacgccgccgagcgctactaccgcagcctcgccgacgccctcgcgtctctccccgac
gaaacccccggacgcggctgcctgctgctcaacagtgccgccggtttcgccgcgcacgac
gacacacaacggtccgtcgtcgacgcataccagcgcgaactgtccggggcgctcgcccac
gctctccgggcccacgacccggacgcgtcgacgaccaccctggcacaccggacccggctc
ctgacgtcactgtccgtcagcgcgctcctgctgtcgcgggtcaaccgggacgaggccgtc
gcggtcgcgaacaccgctgtcgagcaactggaggaatggcggcccacctcctga
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