Roseovarius sp. AK1035: RAK1035_0592
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Entry
RAK1035_0592 CDS
T05517
Name
(GenBank) RND efflux system, inner membrane transporter CmeB
KO
K18138
multidrug efflux pump
Organism
rok
Roseovarius sp. AK1035
Pathway
rok01501
beta-Lactam resistance
rok01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RAK1035_0592
01503 Cationic antimicrobial peptide (CAMP) resistance
RAK1035_0592
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rok02000
]
RAK1035_0592
01504 Antimicrobial resistance genes [BR:
rok01504
]
RAK1035_0592
Transporters [BR:
rok02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RAK1035_0592
Antimicrobial resistance genes [BR:
rok01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RAK1035_0592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
AWZ19303
LinkDB
All DBs
Position
complement(590369..593476)
Genome browser
AA seq
1035 aa
AA seq
DB search
MASFFIDRPVFAWVISILIMGVGVLAILILPVAQYPQIAPPSVTVTANYPGASADTVANT
VTQVIEQQMTGLDGLRYFSSRSTSAGSAEVTLTFETGTDADIAQVQVQNKLGQATPLLPE
IVQRQGITVEKSSAGFLMVVGMISTDGTLDQVDLSDYMVTNLVDELSRTEGVGSVNVFGA
QYAMRIWLDPSKLAGFGLTPSDVVAAVSAQNAQISAGAFGAQPAVEGQQLNATITAQSLL
STPEDFRQIVLRAETDGGLVLLDDVARVEIGAENYATTARFNTDPAAGMAITLAPGANAL
DTARAIKERMVEFARFFPEGVDYVIPYDTTPFVEISIKEVVKTLFEAIGLVFLVMFLFLQ
NLRATLIPTLAVPVVLLGTFGVLAAAGFSINTLTMLAMVLAIGLLVDDAIVVVENVERIM
EEEGLGPREATHKSMGQITGALVGIAMVLSAVFVPMAFFPGSTGVIYQQFAITIVSAMAL
SVVVAITLTPALCASLLKAKNGHGATRGPFAWFNTGFGKLTNGYGGAVGWSVRRPVRVFV
VYLALALGMALMFLRTPTGFLPEEDQGILFTLIQTPTGSSAERTLEVIKQVEDYYLEQET
DVVNSMFGVVGFSFSGNGQNMGLAFVQLKDWEERTEPGQSVQALAGRAFGAFSQIRDAMV
FPVVPPSVIELGNVSGFDFYLQARAGQSHADLMAARNQLLGMAAQSDLIASARPNGLEDA
AQYNLDIDWRKAGAMGLTPTDVGQLLQIAWAGSYVNDFLDQGRIKRVYVQGEADARAQPT
DIDKWRVRNASGGLVPFSNFAEGRWDYGAQGLYRYNGIPSVQLQGSPAPGVSTGEAMAEM
ERLVAELGQGYELAWTGLSLEERESGNQAPLLYALSLAAVFLSLAALYESWSIPFAVMLA
MPIGIVGALTGAWIGGFENGVFFQVGLLTVVGLTGKNAILIVEFARERYEAGETILEAVI
EAARQRFRPIIMTSMAFSLGVLPLVLSSGAGSGGRNAIGSGVLSGTISGTVLGVVFVPLF
FVIVTRLFGRAKSRD
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggccagcttttttatcgaccgcccggtgttcgcatgggtcatttcgatcctgatcatg
ggggtcggggtgctggccatcctgatcctgcctgtggcgcaatatccgcaaatcgcgccg
ccttctgtcacggtcaccgccaattatcccggggcctcggccgatactgtggccaatacg
gtcacacaggtgatcgagcagcagatgactgggctcgacggcctgcgctatttctcgtct
cgctcgacctcggcgggcagtgccgaggtgacgctgacctttgagacgggcaccgatgcg
gatattgcgcaggtgcaggttcagaacaagctgggtcaggccacgccactcttgcccgag
attgtgcagcgtcaggggatcacggtcgagaaatcctcggcaggcttcctgatggtggtg
gggatgatctcgaccgatggcacgctcgatcaggtggacctgtcggattacatggtcacc
aaccttgttgatgaactaagtcggaccgagggggtcggatcggtcaacgtttttggtgcg
caatatgcgatgcggatctggctcgacccgtccaagctggcgggattcggcctgacgccg
tcagacgttgtggcggcggtttcggcgcagaacgcgcagatttctgctggtgcctttggc
gcgcaaccggcggtcgaaggccaacaactcaacgccacgatcaccgcgcaatcgctgctc
agcacgcctgaggatttccgtcagatcgtgctgcgtgccgagactgacggcggcctcgtg
ttgctcgacgatgtggcgcgggtcgagattggggcggaaaactatgccacgacggcgcgg
ttcaacaccgaccctgcggcaggtatggcgatcacgctggcaccgggggcgaatgccctc
gatacggcgcgcgcgatcaaggagcggatggtcgaattcgcccgcttctttcccgaaggt
gtggattacgtgatcccctatgacaccacgccctttgtcgagatttcgatcaaggaagtg
gtcaagaccctgttcgaggcgattggtcttgtgtttctcgtgatgttcctcttcctgcaa
aacctgcgcgcgacgcttatccctaccctcgcggtgcctgttgtcttgttgggcaccttc
ggggtgctggcggcggcggggttctcgatcaacacgctgacgatgctggcgatggtgctg
gcgatcggccttttggttgatgacgcgattgtcgttgttgaaaatgtcgagcgtatcatg
gaggaagagggccttggcccgcgtgaggccacgcataaatccatgggccagatcaccgga
gcgctggtgggtattgccatggtgctttcggcggtgttcgtgccaatggcgttctttccc
ggctcgaccggtgtgatctatcagcaattcgcgatcaccatcgtgtccgccatggcgctg
tcggtggtggttgcgatcacgctcacgcccgcgctctgcgcgtccctgctcaaggccaag
aacggccatggtgcgacgcgcggaccgtttgcgtggttcaacaccggctttggtaagctg
accaatggctatggcggcgcggtgggctggtcggtgcgccgcccggtgcgggtgttcgtc
gtctatttggcgttggcgttgggcatggcgctgatgttcctgcgcacgcccaccgggttc
ctgcccgaagaagaccagggcattctctttaccctcatccaaacccctaccggatcaagc
gccgagcgcacgctggaggtgatcaagcaggtcgaggattattatctcgaacaagaaacc
gatgttgtgaactcgatgttcggcgtcgtcggcttcagcttttcggggaatgggcagaac
atgggtctggcctttgttcagctcaaggattgggaagagcggaccgaaccgggacagagc
gtgcaggccttggcgggccgtgcctttggggcctttagccaaatccgtgatgcgatggtg
ttcccggtcgtgccgccctcggtgatcgagctgggcaatgtgtcgggctttgatttctac
ctgcaagcgcgggcggggcaaagccatgccgatctgatggccgcgcgcaatcagctgctg
ggcatggcggcgcaaagcgatcttatcgcctcggctcggcccaacgggctagaggatgcg
gcgcaatacaatcttgatatcgactggcgcaaggcgggggctatggggctgacgccgacg
gatgtggggcaattgctccagattgcttgggcgggcagctatgtgaacgacttccttgat
cagggccggatcaagcgggtttatgttcaaggagaggccgacgcgcgcgcgcaacccacc
gatattgacaaatggcgggtacgaaacgccagcggcgggctggtgccgttttccaatttc
gccgaagggcgatgggattacggcgcgcaggggctttatcgttacaacggcatcccatcg
gtgcagttgcagggctcgcccgcgcccggtgtgtcgacgggcgaggcgatggccgagatg
gagcgtctcgtggcggaactgggacagggctatgagctggcctggaccgggctgtcgctg
gaagagcgcgagtcgggcaatcaggcaccgctgctctacgcgctttctttggcggcggtg
ttcctatcattggcggccctctatgaaagctggtcaattccctttgcggtcatgttggcc
atgcccatcggcatcgtgggcgcgctgaccggcgcgtggattggcgggtttgagaatgga
gtattctttcaggtggggctgctgacggtggtgggcctcacgggcaagaatgcgatcctg
atcgtagagtttgcccgagaacgctatgaggcaggcgagaccattttggaggcggtgatc
gaggcggcgcgtcaaaggttccgaccgatcatcatgacttcgatggcgttctctcttggc
gttctgccgcttgtgctgagttctggcgcagggtccggtgggcgcaatgccattgggtcc
ggcgtgctgagcgggaccatttcgggcacagtgttgggcgtggtctttgtgccgctcttc
tttgtgatcgtgacgcgtctctttggccgggccaagtcgcgcgattga
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