Roseovarius sp. AK1035: RAK1035_1808
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Entry
RAK1035_1808 CDS
T05517
Name
(GenBank) Hemolysin-type calcium-binding region
Organism
rok
Roseovarius sp. AK1035
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
An_peroxidase
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
AWZ20519
LinkDB
All DBs
Position
1866430..1875567
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AA seq
3045 aa
AA seq
DB search
MAVKLNIADLEFFLRQVKISEAHASGTPLTEIYVDADGNVVPEGTPGAVLAIPEALVPNG
LRTVDGRYNNLIEGRETWGAADTPMPRLLSQTFLNDQDGDEMPLGAPGGPLVTNTDYGVI
GTPSGTNGGHTGNVADADPRIISNLVVDQSTANPAVVEAWFANDAALAAFHERYGEDAIP
IRPGEGPEALELLNTSFEDQPLLDGAPGVTSNPLGNFTTTAPSDWTITGGSGGLFAPVDS
VSSTAGHPGPNVAWLTGGATLSQDSGTLTEGASYQLSLSVGDRTDQVWSGGTARLVAVGA
GGVTTVISSVTLPEPADGQWADLTLNSGPISAGLAGQTLRVEIQQTGGSQVLVDNVALST
SNGNEIEIDNIDLATIPNIAPDDGISAPFNAWMTFFGQFFDHGLDLITKGDNGTVFIPLQ
ADDPLVLGADGIAGTADDLPNHLRFMALTRSTPVDGPGADGVLGTADDTQHEGQNTTTPF
VDQNQTYTSHASHQVFLREYAFDTNGNPVSTGKLLDGANGGIPTWAEVKAQARDLLGIEL
TDGDVLNIPLLRTDDYGEFIRGPNGLPQIVVGIGADGIPNTADDDVVEGNLAAPVNTFTA
GAIRIGHAFLDDIAHAANPFDSQSGMLKTADDDTAVGLSDSVSTAGTYDNELLDRHFVTG
DGRGNENIGLTAVHHVFHSEHNRQVVAQKKTILESGDIDFINEWLLVDLAAGDPIPTDPT
ALTWDGERLFQAGRFATEMQYQHLVFEEFGRKIHPNIDPFVFNAVTDINPSIFAEFANVV
YRFGHSMLTENMPRVLVNELTGEVTTDNMGLIAAFLNPVAYDNDGAMSADAAAAAVILGM
TTEQGSQIDEFIVPALRSNLLGLPLDLAAINIARGRDTGIPSFNDARAELFQQTNSVWLK
PYENWVELAANLKTPMTIVNLLAAYGTHSTILAANTLEEKRDAAFDLVFGGGGVSDADRF
DFLLGRNGWTSDTNGLNTIDLWVGGLAERIMPFGGMLGSTFTAIFEAQMEALQDGDRFYY
LTRTQGQNFLNELEENSFSKMLLANTSLADPGADGIRGTEDDVVRHHIGVDSFARYDFVL
EVNQANQLIDDPVGNDPVLEGLGMGKVVRDDPTTSEVETNYIRVTGGEHLAVGGTNGNDT
IITSDGDDGIWGDDGDDFIESGFGVDLVNGGGGNDIILDSGDEGDFLKGEGGDDVMASAN
GLDVLMGGTGKDVIFLGVDSSEVFGGSGDDFIMGGAGADFLLGNEGDDWMEADGGFDTTA
GDNSELFFNSKIIGHDVMFAGSDEHDFDAESGDDIMVQGESVMRNEGMFGFDWVSYKGVA
IDAYADMRIKIFTTDEEDILRNRFDKVEGLSGWQMNDTLIGDDRVAPGTGEGAEAELFND
GLDQAGIDRIDGLSDLVTLLNGEEFWENGNIIMGGGGSDLITGNGGDDIIDGDRWLNVRI
RITGDPTDENTAANEIATVDTLRHIFTEEDGVDPAWVGQSLFELLVSRTIVPAQMNIVRE
ILDGGQEDDIDIAVFSDNRDQYTITNLGNDVFQVEHTGFGTNPAILIDDGIDTLHNIELL
RFADGDFALPRPATGMPVINDPTPTNGQVSPVEGQLLTVDTSGIADVNGLGAFSFQWQFL
DGAVWTDIPGATDATFTPNDPNFIQQLLGDISEIGRQLRVEVSFTDGVGTLETVYSEPTL
AVAENTGVTLNGTTFSNNSLNGSAGNDLLTGVSPFFGVGGNDTLNGNGGDDILNGQAGND
VLNGGAGFDQLDGGGGADVLNGGADDDIIIAGGGTDTIIQASTDGRDVVDGGTGNDTFRV
QGNAEAETFTVYAMSGGQNAGLAASLGTSFLASTEIVITRTVGTTTTVVAELDNIEEIAV
DTLAVSANDGNGVPNGGVVGGDTVAIVGNFVPTSLNFSTITVNGTAADDTIDISALTSAH
RIVFRGEGGNDTIIGTLRPQDVIELPGIGDPVVTVNEDGMVTVSRGGSSVTFDGSSGLPG
IGGGTTSDDDVADGSFSLSARDLEGLKNLVNGELAFDGDDDTEEATGVRTLSGEGNNEAN
PAYGAAGEPFIRLTEARYGDPDENGNRQINPIFDGLDPRAISNILGPHDDTTAPNAMNAS
ALFMAFGQYFDHGLDFIAKNPAFGTIEIGGPGAERSPTSDNPADLTRAEVAGYDEDGVPQ
HTNMTSPFVDQNQAYGSHELVGQFLRESDGAHGFGMRLLGGEADPSDPAFTLLPTLRDLI
LHHWEAETYFEDPGLPGGAARLQDVFPDLVDEITGEIDPDMVQALASDFLGSGQPLLLDA
NPFIDLLDHRMAGDGRANENFALTSVHTVWARNHNFHVENMLAQGFEGSDEEIFQAAKML
NESDYQRVVFQEFADKLLGGLRNADGDREDHGWDGYNPDVDARISHEFAAAAYRFGHSLV
GENLQVQGPNGELIQVPLYDAFLNPSNDPSVFNGPLPQGYVPAPGYAQYGVAAIIGGTAV
QAAEEVDLKIVEAIRSDLVRINADLFSFNVARGWDVGLGTMNQVRTQLAASTDPYVSQAV
DMAGDLSPYSSWADFQARNDVSDEDMARLMEAYPDLVLETPAQIAAFVAVNPDVVLEDGA
NGAKIVKGIDRVDLWTGGLAEKHVNGGMVGQTFWVVLHEQLDRLQEGDRFYYIDRFDNFD
FYQEFGEDTTFASIVARNTSLTDIDNNLFDANGIDDDDDNATEDDNATEDDNATEDDDDT
AGGDDDNATDGDDDTAGGDEDNATDGDDDTADGDEDTASDDQDDTAGDNDTEGDEDDDEP
EDNDSNVTPPLAASGNVIGTAAADALFGGAEGDNILALAGRDMIFAGDGDDNVLAGSGRD
MIFGDGGNDRLFGEGGDDFIEGGAGNDFVVGGAGADLFVATMNDGDDVYYGDDVTGGSGS
DTLDMSQITADTSVDLGSASGGRGYASSAQSGNDVLWSIESFIGGAGNDTITAGSAQNEM
DGGVGNDVYRFLSASDADGDTISSFEPGDKIDLSQIDANGSGPGKGTFTLVSEAFSGGGQ
ILVTHETGANGDVTVIQGNIEGDNGPDFSISIRGRHDLTQDDFQL
NT seq
9138 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcaaactgaatatcgcggacctcgagttctttcttcggcaggtcaagatcagc
gaagcgcatgcgagcggaacgccgcttaccgaaatctatgtcgacgctgacggcaatgtc
gtaccagaagggacaccgggcgctgttcttgctattccagaggcccttgtgcccaacggt
ctgcgcacagtcgacggcagatacaacaatctgattgaaggacgcgaaacatggggcgca
gcggatactcctatgccgcggcttctcagccaaaccttcctcaacgatcaggatggcgac
gagatgccgcttggtgcgcctggcgggccgcttgtcaccaacacggactatggcgtgatc
ggcacaccgtcgggcaccaatggaggacataccggcaacgtcgccgatgccgatccgcgg
atcatctctaacctcgttgtagatcagagtacggcgaacccggccgtggtcgaggcatgg
tttgcgaatgacgccgcactggcggcgttccacgaacgctatggcgaagatgcaattcca
attcgtcccggcgaaggccccgaggccttggaactcttgaacacaagtttcgaggatcaa
ccgctccttgatggcgcacccggggttacgtcgaacccgcttggcaatttcaccacgact
gcgcccagtgattggacgattacaggaggatcaggcggtctatttgcaccagtggacagc
gtaagttcaaccgctggtcatcccggtccaaacgttgcgtggctgaccggtggtgccaca
ctgtctcaggacagcggcactctgaccgagggtgcgagctatcaactgagcctgagtgtc
ggagatcgcaccgatcaggtttggtccggcggcaccgcccgccttgttgccgtaggcgct
ggcggcgtgaccacggtcatttcctctgttaccctgccagaacccgcagatgggcagtgg
gccgatctgacgcttaattcaggtccgatctctgcgggtcttgcgggccagacgctgcgt
gtcgagattcagcaaaccggcggctcgcaagtgctcgtggacaatgttgcgctgtcgacc
tcgaacggcaacgagattgagatcgacaacatcgaccttgcaacgattcccaatattgcg
cctgatgacggcatctcggccccgttcaatgcctggatgactttcttcggccagttcttc
gaccatggccttgatcttatcaccaagggcgacaatggaacggtctttattccgctacaa
gcggacgatccgctcgttctcggggcggacggcattgctggaactgctgacgatcttccg
aaccatctgcgctttatggcgctcacccggtcgacgcccgttgacgggcccggtgcggat
ggggtgctgggtacagcagatgacacgcagcatgaggggcagaacaccaccacgcccttt
gttgatcaaaaccagacctacacgtcgcacgcctcgcatcaggtattcctgcgcgagtat
gcatttgataccaatggcaacccggtctcaactggcaagcttttggatggcgcaaatggc
ggaattccaacctgggcggaagtgaaggcgcaggcgcgcgatcttctcgggattgagctg
accgatggcgatgtcctgaacatcccacttttgcggactgatgactatggcgaattcatt
cgcggtcccaacggcctgcctcagatcgtggtgggtattggcgcggatggcattccgaat
actgctgacgatgatgtggtcgaaggcaacttggcagcccccgtaaacacattcacggca
ggcgcgatccgcatcgggcatgcgttcttggatgatatcgcacatgccgcaaatccgttc
gactcgcaaagcggtatgctcaaaactgcagacgacgacactgcggtaggtctctccgat
agtgtcagcacagccggaacctatgacaatgaactgcttgaccgccatttcgtcaccggt
gatggccgaggtaacgagaatatcggcctgaccgcggtccaccacgtcttccactccgag
cacaaccgtcaggttgtggcccaaaagaaaaccattctggagtcgggcgatattgatttt
atcaacgaatggcttcttgtcgatctcgcggcaggcgacccaattccaaccgatcccact
gcgttgacttgggatggcgaacgcctgttccaagcagggcgcttcgcgaccgaaatgcag
tatcagcaccttgtcttcgaagagttcgggcgcaagatccacccgaatattgatcccttc
gtcttcaacgcggtcacagacatcaatccgtccatctttgccgaatttgccaacgttgtg
tatcggttcggacattcaatgctgaccgagaacatgccgcgtgtcttggtgaacgagctg
accggcgaggtcactactgacaacatgggcctgatcgccgccttcctcaatccggtggcc
tatgacaacgatggcgcgatgagcgcggatgcggcggcagccgccgtgatccttggcatg
acgacggaacagggcagtcagattgacgaattcattgtccccgcgctgcgcagcaatctg
ctcggtctgccgcttgacctagccgcgatcaacatcgcgcgaggccgcgacaccggtatt
ccctcattcaacgatgcgcgggcagagctttttcagcagaccaattctgtttggctgaaa
ccctatgaaaactgggtcgagttggcggccaacctgaagactccaatgacgattgtgaac
ctgctggcagcctatggaacccattcgacaatcctcgcggcaaacacgcttgaagagaaa
cgtgatgccgcgtttgatctcgtgtttggcggggggggcgtgtcagatgccgatcgcttt
gacttcctgcttgggcgcaacggttggacgtctgacaccaatggcctgaatacgattgat
ctctgggtcggtggtctggccgaaaggatcatgccgttcggcggcatgcttggatcgacg
ttcaccgctattttcgaggcgcagatggaggcgcttcaggacggagacaggttctattat
ctcacacggacccaagggcagaacttcctcaacgaactcgaagagaactcgttctcgaag
atgcttctggccaacaccagcttggctgatccgggcgcagacggtatccgcggaaccgaa
gacgacgttgtgcgccaccatattggtgtggattcctttgcgcgctatgactttgttcta
gaagtcaatcaggccaaccagttgattgacgatcccgtagggaacgatccggtactcgaa
ggccttggcatgggcaaggtcgtgcgggatgatcccacaacgagcgaagtcgaaaccaac
tacattcgcgtcaccggcggagagcatctcgcggtgggcggcaccaacgggaatgacacg
atcatcacctctgacggtgacgacggcatctggggggatgacggcgacgatttcatcgag
tcagggtttggcgttgaccttgtgaacggcggtgggggcaatgacatcatcctcgactct
ggggatgaaggcgacttcctcaagggggaaggtggcgacgacgttatggcctctgcgaac
gggcttgacgttctcatgggcggcacaggcaaggatgtcatcttcctcggggtcgactcg
tcagaggtgttcgggggatcaggcgacgatttcatcatgggtggagccggcgctgacttc
ctgttgggcaacgaaggtgacgactggatggaagccgatggcggctttgacacgacagcc
ggtgataactccgaactgttcttcaatagtaagattatcggccatgacgttatgttcgcg
ggatctgacgagcatgatttcgacgccgaatccggtgacgacatcatggtccaaggcgag
agcgtgatgcgcaacgagggcatgttcgggtttgactgggtctcgtacaagggcgtggca
atcgacgcatatgccgatatgcgtatcaagattttcaccaccgacgaggaggacatcctg
cgcaatcgctttgacaaggtcgaagggttgtcagggtggcagatgaacgacacgctgatc
ggtgacgaccgcgttgcgcccggaaccggagagggcgcagaagctgaactctttaacgat
gggcttgatcaggcaggcattgaccggattgacggcctttcagatcttgtcacgctcttg
aacggcgaagagttctgggaaaatggtaacatcatcatgggtggtggtggctctgacctg
atcaccggcaatggtggcgacgatatcatcgacggcgaccgctggctaaatgtgcgcatt
cgtatcactggcgatccgaccgacgagaataccgcagcgaacgaaattgcgacggttgat
acgcttcggcatatctttaccgaagaggatggggtggatcccgcttgggtgggacaaagc
ctgttcgaactgctggtttcgcgcaccatcgtgccggcccagatgaacatcgtgcgcgaa
attctcgacggtggacaagaggatgacatcgacatcgccgtgttcagcgataaccgggac
cagtacacgatcaccaaccttggcaacgatgtctttcaggtggaacataccgggtttggc
accaatcctgccatcctgatcgacgacggaatcgacacgctccacaacatagagctgttg
cgctttgcggatggagactttgcgcttccccggccggcgacaggcatgcctgtcatcaat
gacccgaccccgaccaatggccaagtctcgccagtcgagggccaacttctgacggtggat
acgagcggcatcgccgacgtgaatggtcttggggccttcagctttcagtggcagtttctt
gatggtgcggtctggaccgacattcccggtgcgactgatgcgacgttcacgccgaatgac
ccaaacttcattcagcagcttttgggcgacatcagcgagatcggtcgtcaacttcgagtc
gaggtaagctttactgacggagtcggcacgctcgagaccgtgtattccgagccgaccctt
gcggtggccgagaatactggtgtgacgctgaatggaacaacattttcaaacaactccctc
aacggtagcgctggcaatgatttgctgaccggtgtcagcccgttcttcggagtcggcgga
aacgacacactcaacggcaacggtggcgacgatatcctgaacggacaggctggtaatgac
gtcttgaacggtggagcaggctttgaccagttggacggcggcggcggcgctgatgttctc
aacggcggcgcggatgacgacatcatcattgctggcggtggcactgacaccatcattcag
gcatcgaccgatgggcgcgatgtggtggatggcggaactggcaacgacaccttccgcgtt
caaggcaacgccgaggctgaaaccttcactgtctacgccatgtcaggtggccagaacgct
ggccttgctgccagcctcgggacgtctttcctcgcatcgaccgagatcgtgatcacgcgc
actgtcggcacgacgaccacggtggtcgccgagttggacaacattgaagagatcgctgtc
gacacactcgccgtgtctgcaaatgacggcaacggcgtaccaaacggcggcgttgtcggc
ggagacacggtcgcgattgttggaaactttgttccaacgagccttaacttcagcacaatc
accgtcaatggcacggccgccgacgacactatcgatatatctgctctgacatcggcacac
cggatcgtgttccgaggcgagggtggcaacgacacgatcattggcacgctgcgtccacaa
gacgtgatcgaactgcccgggatcggcgatccggtcgtgactgtcaacgaagacggcatg
gtcacggtaagccggggtggatcgagtgtcacctttgacggatcgagcggattgcccggt
attgggggtggtacaacgtcagacgatgacgtcgccgatgggtcattctcgctgagcgcc
cgcgatctggaaggtttgaagaacctcgtcaacggcgagttggcctttgacggcgacgat
gacaccgaagaagccaccggcgtcagaacgctgagtggtgagggcaacaatgaggccaat
ccagcgtatggggcggcgggtgaacctttcatccggttgaccgaggcacgttacggtgat
ccggatgaaaatgggaaccggcagatcaacccaatctttgatggtctcgatccgcgtgca
atctctaacattctcggcccgcatgatgatacgacggccccaaatgcaatgaatgcgagt
gcgcttttcatggccttcggtcagtacttcgaccacgggctcgacttcatcgccaagaac
cccgccttcggtacgattgaaatcggggggccaggtgcggaacgcagcccgacatctgac
aatccggctgacctgacgcgcgcagaagtcgcgggttatgacgaagacggcgtgccgcaa
cacaccaacatgacgtcgcccttcgtcgaccaaaaccaagcctatggcagccatgagctt
gttggccagttcttgcgcgaaagtgatggggcacatgggtttggcatgcggcttttgggg
ggcgaggccgatccttcggatccggcattcacgctcttgccaacgttgcgcgatctgatc
ctgcaccattgggaggcggaaacatactttgaggatccagggttgccgggtggcgcggca
aggcttcaggacgttttcccggatctggtcgatgagatcaccggggagattgacccggac
atggtgcaggcgctcgcttcggatttccttggctccgggcaacctctactgctcgacgcc
aatccgttcatcgacctgcttgaccaccggatggcgggcgatggccgcgcgaacgagaat
ttcgcgctgacatcggtgcacacagtctgggcgcggaatcataacttccacgtcgagaat
atgctcgcgcagggatttgagggaagcgacgaggagattttccaggctgccaagatgctc
aacgagagcgattatcagcgcgttgtgttccaagagttcgcggacaagcttcttggcggt
ttgcgcaatgcagacggcgacagagaagatcacggctgggatggctacaatcccgatgtg
gacgctcggatcagtcacgagttcgcggccgcagcctatcgctttggtcactcgctggtt
ggagagaacctacaggttcaggggccaaatggagaacttattcaggtgcccctgtacgac
gccttcctcaacccgagcaatgatccgtcagttttcaatggcccactaccacaaggttac
gttcccgctcctggctatgcacaatacggcgttgcagccattatcggcggcacggcggtg
caagcggcggaagaagtcgatctaaagatcgttgaggcgatccgatccgatcttgttcgg
atcaatgccgatctcttctctttcaacgtcgcccgtggctgggatgttggacttgggacg
atgaaccaagttcgcactcagcttgcggcttcgactgacccctatgtttcccaagctgtg
gacatggcgggcgatctgtcaccttacagcagctgggcggatttccaggcgcgcaatgat
gtgagtgacgaagatatggcgcggctgatggaagcctatccagatctggttctggaaacg
ccggctcagattgctgcttttgtcgcggtgaacccggacgtcgtgctcgaagacggtgcg
aacggcgccaagatcgtcaagggtatcgaccgggtcgatctttggaccggcggacttgct
gaaaagcacgtcaatggaggtatggttggtcagactttctgggtcgtgctccacgaacag
ctcgaccgcctgcaagagggcgaccggttctactacatcgaccggtttgacaacttcgac
ttctatcaggagttcggagaggacacgacctttgccagcattgtcgctcgaaacaccagc
cttacggatatcgacaacaacctcttcgatgccaacggtatcgacgacgatgatgacaac
gccacagaggatgacaacgccacagaggatgacaacgccacagaggatgacgacgacact
gccggtggcgatgatgacaacgccacagacggtgacgatgacactgccggtggcgatgag
gacaacgccacagacggtgacgacgacactgccgatggcgatgaggataccgccagtgac
gaccaagacgatactgccggtgacaacgacaccgaaggcgacgaggacgacgacgagcct
gaagacaatgacagcaacgtcaccccgccgcttgcagcgtcaggcaatgtgattggaacg
gcggctgccgacgcgctctttggcggtgccgaaggggacaatatcctggccttggctgga
cgtgacatgatctttgctggcgacggtgacgacaatgttctggcgggcagcggacgggac
atgatctttggcgatggcggcaatgacaggctcttcggtgaaggcggtgacgatttcatc
gagggcggggctggcaatgacttcgtcgtagggggtgccggtgctgatctgttcgtggcg
acaatgaatgacggtgacgacgtttattacggcgatgacgtaacgggcggatcaggttcc
gatacgctcgacatgtcgcagatcacagcagataccagtgtcgatcttggaagcgcctcc
ggtggaagaggatatgcgtcaagtgcccaatctgggaacgacgtgttgtggagtatcgag
agcttcatcgggggggcagggaacgataccatcaccgcaggcagtgcgcaaaacgagatg
gacggcggcgtgggcaatgatgtctatcgctttctgtcagcctcggatgccgatggtgat
acgatcagctcctttgaacccggcgacaagatcgacctttctcagatcgacgcgaacggt
tctgggcctggcaagggcaccttcacactcgtctctgaggccttttcgggcggcggtcag
attctcgtgacccacgagaccggtgcgaatggtgatgtgaccgtaattcagggcaacatc
gaaggagataacgggcctgatttcagcatttcgatacggggacgccacgatctgactcag
gacgattttcagctctga
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