Raoultella ornithinolytica S12: TE10_03330
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Entry
TE10_03330 CDS
T03629
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ron
Raoultella ornithinolytica S12
Pathway
ron00071
Fatty acid degradation
ron00280
Valine, leucine and isoleucine degradation
ron00310
Lysine degradation
ron00362
Benzoate degradation
ron00380
Tryptophan metabolism
ron00410
beta-Alanine metabolism
ron00640
Propanoate metabolism
ron00650
Butanoate metabolism
ron00907
Pinene, camphor and geraniol degradation
ron00930
Caprolactam degradation
ron01100
Metabolic pathways
ron01110
Biosynthesis of secondary metabolites
ron01120
Microbial metabolism in diverse environments
ron01200
Carbon metabolism
ron01212
Fatty acid metabolism
Module
ron_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ron00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
TE10_03330 (fadB)
00650 Butanoate metabolism
TE10_03330 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
TE10_03330 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
TE10_03330 (fadB)
00310 Lysine degradation
TE10_03330 (fadB)
00380 Tryptophan metabolism
TE10_03330 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
TE10_03330 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
TE10_03330 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
TE10_03330 (fadB)
00930 Caprolactam degradation
TE10_03330 (fadB)
Enzymes [BR:
ron01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
TE10_03330 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
TE10_03330 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
TE10_03330 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
TE10_03330 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
CetZ_C
Motif
Other DBs
NCBI-ProteinID:
AJF71151
LinkDB
All DBs
Position
complement(711191..713380)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDNLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGHALDVLEKQTDLKGLLLRSE
KAAFIVGADITEFLSLFLVPQEQLSQWLHFANSVFNRLEDLPVPTVSAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRLLGADSALEIIAAGKDVGADQALK
IGLVDGIVKPEKLRDGALSILRQAISGDLDWQAKRQPKLEPLKLSKIEATMSFTIAKGMV
VQTAGKHYPAPMTAVKTIEAAARLGRDEALKLENQSFVPLAHTKEARALVGIFLNDQYVK
GKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAWKGVPVIMKDINDKSLTLGMNEAAKLL
NKQLERGKIDGLKLAGVIGTIQPTLDYSGFERVDVVVEAVVENPKVKKAVLAETEGKVRP
DTVLASNTSTIPIGELADALQRPENFCGMHFFNPVHRMPLVEVIRGEKTSDETIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKLFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDATRFGQKNGLGFWRYTQDSKGKP
KKEEDAAVDGLLADVSQPKRDFSDEEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYEVPEGLRSKARHNEPYYPPVEPA
RPAGVLKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctacaaaggcgacaacctgtacctcgactggctggaagatggcattgccgaactg
gtgttcgatgcccccggctcggtgaacaagctcgataccgcaaccgtagccagcctcggc
catgcgctggacgtgctcgaaaagcaaacagatcttaaagggctgctgctgcgctctgaa
aaagcggcctttatcgtcggtgccgatataaccgaatttctctccctgttcctggtcccg
caggagcagctgagccaatggctgcattttgccaatagcgttttcaaccgcctcgaagat
ttaccggtgcccaccgtttcagcggtcaacggctatgcgctgggcggcggctgcgagtgc
gtgctggcaacggactatcgtctggctacgccggacctgcgcatcggcctgccggaaact
aagctgggcatcatgccgggcttcggcggttcagtgcgtatgccgcgtctactcggcgcc
gatagcgcgctggaaattatcgccgccggcaaagacgtcggtgcggatcaggcgctgaaa
atcggcctcgtcgacggcatcgtcaagccagagaaactgcgcgacggcgcgctcagcatt
ttacgccaggccattagcggcgatctcgactggcaggcgaagcgccagccgaagctggag
ccgctgaagctcagcaaaatcgaagcgaccatgagcttcaccattgcgaaaggcatggtt
gtccagaccgccgggaaacactatccggcgccgatgaccgccgtcaaaaccatcgaagct
gccgcccgactcggccgtgatgaggcgctgaagctggaaaatcaaagcttcgtcccgctg
gcgcacaccaaagaagcccgcgcgctggtcggcatcttcctcaacgatcagtacgtcaaa
ggcaaagcgaagaagctcaccaaagacgttgaaaccccgaaacaggccgccgtgctgggc
gccgggattatgggcggcggtatcgcctatcagtctgcctggaaaggcgtgccggtcatc
atgaaggatattaacgacaaatcgctgacgctcggcatgaatgaagccgccaagctgctt
aacaaacagcttgagcgcggcaagattgacggcctgaagctggctggcgtcatcggcacc
attcagccaacgctggactactctggctttgagcgcgtggacgtggtcgttgaagccgtt
gtcgaaaacccgaaagtgaaaaaagcggtgctggctgagaccgaaggcaaagtgcgcccg
gatacggtgctggcttccaacacctctacgatcccgatcggtgaactggcggacgctctg
cagcgtccggagaatttctgcggtatgcacttctttaacccggtgcaccgtatgccgctg
gttgaagtgattcgcggcgaaaaaacctcggacgagacgattgccaaagtggtggcctgg
gccagcaagatgggcaaaacgccgatcgtggttaacgactgccccggtttcttcgtcaac
cgcgtgctgttcccctacttcgccggcttcagccagctgctgcgcgatggcgcggacttc
cgcaaggtcgataaggtcatggagaagctgttcggctggccgatgggcccggcgtacctg
ctcgacgtggtcggcatcgataccgctcaccacgcgcaggcggtgatggccgccggcttc
ccgcagcgcatgcagaaagattatcgcgatgcgattgacgccctgttcgacgcaacccgc
ttcggccagaaaaacggccttggcttctggcgctatacccaggacagcaaaggcaaaccg
aagaaagaagaggacgcggccgttgacggcctgctggcggacgtaagccagccgaagcgc
gacttcagcgacgaagaaattatcgcccgcatgatgattcccatggtcaacgaagtggtg
cgttgcctggaagaaggcattatcgccagcccggcggaagcggatatggcgctggtttat
ggcctcggcttccctccattccacggcggagccttccgctggctggatacgctgggcagt
gcaaaatatctcgatatggcacagcagtatcagcacctcggcccgctgtatgaggtgccg
gaaggtctgcgcagcaaagcacgccataacgaaccgtattatcctccggtagaaccagcc
cgcccggcgggtgttctgaaaacggcttaa
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