Raoultella ornithinolytica S12: TE10_19940
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Entry
TE10_19940 CDS
T03629
Name
(GenBank) hypothetical protein
KO
K19789
DNA repair protein RadD
Organism
ron
Raoultella ornithinolytica S12
Brite
KEGG Orthology (KO) [BR:
ron00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ron03400
]
TE10_19940
DNA repair and recombination proteins [BR:
ron03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
TE10_19940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
UPF0547
SLFN-g3_helicase
zf-tcix
zinc_ribbon_2
AAA_22
AAA_16
zf-ribbon_3
DZR
Motif
Other DBs
NCBI-ProteinID:
AJF74174
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All DBs
Position
4341604..4343361
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AA seq
585 aa
AA seq
DB search
MNFTLRPYQKEAVDATLAWFRRHHEPAAIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYLALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLEQFQGEFSLLIVDECH
RISDDDDSQYQQIITHLRQVNPQLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNHELKKQQRITPH
IVSQIVEFAQTRKGVMIFASTVEHAREITGLLPAGEAELITGETPGPQRDRIIESFKAQQ
YRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYAPEVGTPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG
HREQCDFRFRFKNCPQCNAENDIAARRCRECDTILVDPDDMLKAALKLKDALVLRCSGMD
LQHGADDKGPWLKITYYDEDGADVSERFRLHTPAQRTAFEQLFIRPHTRTPGVPLRWITA
GDILAQRALLRHPDFVVARMKGQYWQVREKMFDYQGRFRRANELR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaattttacactacgcccctaccaaaaagaggcggtcgatgccaccttagcctggttt
cgccgccaccatgagcccgccgctatcgtcctgccaaccggggcaggcaaaagcctggtc
attgccgaactggcgcgcctggcccgcggccgcgtgctggttctggcgcacgtcaaagag
ctggtggcgcaaaaccacgctaagtatcttgcccttgggctggaagccgacattttcgcc
gcagggctgaagcgcaaagagagccacggtaaggttgttttcggcagcgtgcagtcggtt
gcccgcaatcttgagcagttccagggggagttttcgctgctgatcgtcgatgagtgccac
cgcatcagcgatgacgacgatagccagtaccagcaaattatcacccacctgcggcaggtc
aatccgcagctgcgcctgcttgggctcaccgccacgccgtttcgcctcggcaagggctgg
atttatcagttccattatcatggcatggtgcgcggcgacgagaaggcgctgtttcgcgac
tgcatctatgagctgccgctgcgctacatgattaaacacggctatctgacgccgccggag
cggctcgatatgccggtagtgcagtacgatttcagccgccttcaggcgcagagcaacggc
ctgttcagcgaggccgacctcaatcacgagctgaaaaaacagcagcgcattacgccgcat
atcgtcagccagattgttgagtttgcccagacgcgaaaaggggtgatgattttcgcctct
acggtggagcacgcgcgggaaatcaccggtctgctgcccgcaggcgaggccgaactgatt
accggcgaaaccccgggcccgcagcgcgaccgcattattgaatcgtttaaagctcagcaa
taccgctatctggtcaacgtggcggtgctgaccaccggctttgacgccccgcatgtcgat
cttatcgccattctgcgcccgaccgaatcggtgagcctctatcagcagatcgtcggtcgc
ggcctgcgcctggcgccgggaaaaaccgactgcctgatcctcgactatgccggtaacccg
cacgacctctacgcgcccgaagtcgggacacctaaaggtaagagcgacaacgtaccggtg
caggtcttctgcccggcctgcggttttgccaataccttctggggcaaaaccaccgccgac
ggcacgctgatcgaacattttggccgccgctgtcagggctggtttgaggatgatgacggc
catcgcgagcagtgcgactttcgttttcgctttaagaactgcccgcagtgtaatgcggag
aacgatatcgccgcccgccgctgccgcgagtgcgacacgatcctcgtcgatcccgatgat
atgctgaaggcggcgctgaagctcaaagacgcgctggtgctgcgctgcagcggcatggat
ctgcagcacggtgccgacgacaaaggcccgtggctgaaaattacctactacgatgaagac
ggcgccgacgttagcgagcgcttccgcctgcatacgcccgcccagcgcaccgcgtttgaa
cagctgtttattcgcccgcacacccgcacgcccggcgtgccgctgcgctggataaccgct
ggcgatatccttgctcagcgggcgctgctgcgccatccggactttgtcgtcgcccgcatg
aaggggcaatactggcaggtgcgggagaaaatgttcgactaccagggacgcttccgccgg
gccaacgaactgcgttaa
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