Roseimicrobium sp. ORNL1: G5S37_02070 Help Entry G5S37_02070       CDS       T06460                                  Symbol ligA Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism roo  Roseimicrobium sp. ORNL1 Pathway roo03030   DNA replication roo03410   Base excision repair roo03420   Nucleotide excision repair roo03430   Mismatch repair Brite KEGG Orthology (KO) [BR:roo00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     G5S37_02070 (ligA)    03410 Base excision repair     G5S37_02070 (ligA)    03420 Nucleotide excision repair     G5S37_02070 (ligA)    03430 Mismatch repair     G5S37_02070 (ligA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:roo03032]     G5S37_02070 (ligA)    03400 DNA repair and recombination proteins [BR:roo03400]     G5S37_02070 (ligA) Enzymes [BR:roo01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      G5S37_02070 (ligA) DNA replication proteins [BR:roo03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      G5S37_02070 (ligA) DNA repair and recombination proteins [BR:roo03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      G5S37_02070 (ligA)    NER (nucleotide excision repair)     GGR (global genome repair) factors      G5S37_02070 (ligA)    MMR (mismatch excision repair)     DNA ligase      G5S37_02070 (ligA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       G5S37_02070 (ligA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT HHH BRCT_2 zf-NADH-PPase 5_3_exonuc Auto_anti-p27 Motif Other DBs NCBI-ProteinID:  QIF00360 UniProt:  A0A6G6JYF2 LinkDB All DBs Position 519137..521143 Genome browser AA seq 668 aa AA seqDB search MDKDKDKTSAAKRAEHLRSELERHNRLYYQQAAPEISDREFDQLLRELQDIEKEHPELIT PDSPTQRVGGAPLEGFAQITHRVPMMSLDNTYSEEELSEFYARLQKGLGREKIKCTIEPK VDGVAVSVRYENGVLKHGVTRGDGRVGDDITQNLKTIRSLPLRLPKHVPQTFEVRGEVYM NRAEFEKMNQEREEAGEPRFANPRNSTAGSLKQLDPRDAAKRPLSVIFYGMGDHGEAKLQ SQSQIYDLLKEAGLPKAELLWDCDSIEQMLGVIHELDERRRKLPYDTDGAVIKVDSFAEQ RDLGSTSKAPRWAIAYKYAAEQAETKLLAVDIQVGRTGALTPVARLEPVFLSGSTVSNAT LHNFEEIERKDIRVGDFVTIEKAGEIIPAVVAVSKDKRTGDETPVPVPTECPVCGTPVRK DEGQVAIRCPNSDCPEQVKRRVEHFTHRGAMDIRGLGEQVVGQLVDIGLVHHIPDLYDLN EEALGKLERQGKKSIENLLKGIAESKAQPPWRLLFGLGVPQVGASSARSLVEHFGSIDAL AAASMEDLLKVQDIGGIVAQSIHDWFREEKNVERLDRLRAAGLQFANPKEDRASDKLAGT TWVITGTLSQGRDEVADIIRSHGGKVSSSVSSKTSYLLAGEEAGSKLEKATKLGVKVLTE AEFQELIQ NT seq 2007 nt NT seq  +upstreamnt  +downstreamnt atggacaaggataaggacaagacctccgcagccaagcgtgccgaacacctgcgctctgaa cttgagcgccacaaccgcctctactaccagcaggcggcgccggagatcagcgaccgtgag tttgaccagctcctgcgtgagctgcaggacatcgagaaggaacatccggaactcatcacg ccggactcgcctacccagcgtgtgggtggtgccccgctggaagggtttgctcagatcacg catcgagtgccgatgatgagcctggataacacgtactccgaggaggagctgagtgagttc tacgcacgactacaaaagggactggggcgggagaaaatcaagtgcaccatcgagccgaag gtggatggcgtggcggtttccgtaaggtatgaaaacggcgtgctgaaacacggcgtgacg cgcggtgatggtcgcgtgggggatgacatcacgcaaaacctcaagaccatccgctcgctg cccctgcgcctgccgaagcatgtgccgcagacctttgaagtgcgtggcgaggtgtacatg aaccgcgcggagtttgagaagatgaaccaggaacgtgaagaggcgggtgagccgcgcttt gcgaatccacgcaattccaccgcaggctcgctgaagcagctcgacccccgtgatgcggca aagcgaccgctgagcgtgatcttctacggcatgggtgaccatggtgaggcgaagctgcaa tcgcagagccagatctatgacctcctgaaagaggcgggcttgcccaaggcggaactgctc tgggactgcgacagcatcgagcagatgctgggcgtgattcatgaactggacgagcgtcgc cggaagctgccgtatgacacggacggcgcggtcatcaaggtggattcctttgcggagcag cgggacctcggctccacgagcaaggcgccgcgctgggcgattgcctacaagtacgcggcg gagcaggcagagacgaagctgctcgccgtggacatccaggtggggcgcacgggtgcgctt acgccggtggcgaggctggagccggttttcctcagcggcagcacggtgagcaacgcgacg ctgcacaacttcgaggagattgagcgcaaggacatccgtgtgggtgacttcgtgaccatc gagaaggcgggtgaaatcatcccggccgtggtggcggtgagcaaggacaagcgcacgggc gacgaaacgccggtgccggtgcccacggagtgcccggtgtgtggcacgccggtgcgcaag gatgagggacaggtggccatccgctgccccaacagtgactgcccggagcaggtgaagcgg cgcgtggagcacttcacgcatcgtggcgcgatggacattcgtgggctcggtgagcaggtg gtggggcagctcgtggacatcggcctggtgcatcacatcccggacctgtatgacttgaat gaggaggcgctcggcaagctggagcgtcaggggaagaagagcatcgagaacctgctgaag ggcattgccgagagcaaggcccagccgccgtggcggttgctgtttggcttgggagtaccg caggtgggcgcgtcctcagctcgctcgctggtcgaacatttcggctccatcgatgcactg gcagcggcttccatggaggacctgctgaaggtgcaggacatcggaggcatcgtggcgcag agcatccatgactggttccgcgaggagaagaatgtagagcgtcttgaccgcctgcgcgcg gcaggattgcagtttgccaatcccaaggaagaccgcgccagtgacaagctggcaggcact acgtgggtgatcacgggcaccttgagccaggggcgcgatgaggtggcggatatcatccgc tcccacggagggaaggtctcctccagtgtgagcagcaagaccagctatctgctggcggga gaggaggcgggcagcaaactggagaaggcgacgaagcttggtgtaaaagtgctgaccgaa gcggagtttcaagaattgattcaatga

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