Raoultella ornithinolytica B6: RORB6_03015
Help
Entry
RORB6_03015 CDS
T02625
Symbol
yebU
Name
(GenBank) rRNA (cytosine-C(5)-)-methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
ror
Raoultella ornithinolytica B6
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ror03009
]
RORB6_03015 (yebU)
Enzymes [BR:
ror01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
RORB6_03015 (yebU)
Ribosome biogenesis [BR:
ror03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RORB6_03015 (yebU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
Methyltransf_25
FtsJ
PCMT
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
AGJ85299
LinkDB
All DBs
Position
complement(699523..700956)
Genome browser
AA seq
477 aa
AA seq
DB search
MAQNAVYFPDQFLAQMRDAMPTHLSFDAFIAACQRPLRRSLRVNTLKISVADFLQQVAPY
GWQLTPIPWCEEGFWIERDDEDSLPLGSTAEHLSGLFYIQEASSMLPVAALFADGDMPQR
VMDVAAAPGSKTTQIAARMGNKGGILANEFSASRVKVLHANISRCGISNVALTHFDGRVF
GAALPERFDAILLDAPCSGEGVVRKDPDALKNWSPESNQQIAETQRELIDSAFHALRPGG
TLVYSTCTLNREENEEVVQWLLARYPQAVEVLPLGTLFPQATKALTAEGFLHVFPQIFDC
EGFFVARLKKTAAIEALPAPGYKVGKFPFTPLKSREAAAISAAAAAVGLHWDDHHTLWQR
DKEIWLFPQALESFIGQVRFSRIGIRLAETHNKGFRWQHEAVIALAVPDAPFELTQDEAE
EWYRGRDVYPETTPQQDEVIVTFQGATLGLAKKVGSRLKNSYPRELVRDGKLFAGKA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaaaacgcagtctattttcctgaccaattcctcgctcaaatgcgtgacgcgatg
cccacgcatctctctttcgatgcctttatcgcggcctgccagcgcccgttacgccgcagc
ctgcgcgtgaatacgctgaaaatttccgtcgccgactttctgcagcaggtggcgccctat
ggctggcagctgacgccgatcccgtggtgcgaagagggcttttggatcgaacgcgatgat
gaggactccctgccgctgggcagcaccgccgaacatctcagcggcctgttttacatccag
gaagccagttctatgctgccggttgcggcgctgtttgccgatggcgacatgccgcagcgg
gtcatggatgtggccgccgcccctggttccaaaaccacacagattgctgcgcgcatggga
aataagggcgggattctcgccaacgagttttccgccagtcgggttaaagtcctgcatgcc
aatatcagccgctgcggcatcagcaacgtcgccttgacccacttcgatggtcgggtgttt
ggcgccgcgctgccggaacgctttgacgccatcctgctggatgccccctgctccggcgag
ggggtggtgcgcaaagatcccgatgcgttgaaaaactggtcgcctgagagtaatcagcag
atcgccgaaactcagcgggagctcatcgacagcgcatttcacgcgctgcgccccggcggc
acgctggtgtactcgacctgcaccctgaaccgggaagagaacgaagaggtcgtgcagtgg
ctgttagcccgctatccgcaggcggtcgaggtgctaccgctcggcacgctgttcccgcag
gctacgaaagccttaaccgctgagggatttctccacgtctttccgcagatttttgactgc
gaaggtttttttgttgcccgcctcaagaaaaccgcagcgatcgaggcgctaccggcgccg
ggttacaaagtcggaaaatttccttttacgccgcttaaaagccgggaagccgcagcgatt
tccgccgccgctgccgccgtcggactacactgggatgaccatcatacgctctggcagcgt
gataaagagatttggctgttcccgcaagcgctggaatcatttatcggccaggtccgtttt
tcgcggattggcattcgcctggcggaaacccataacaaaggctttcgctggcagcacgaa
gcggtcattgcgctcgccgtcccggatgctccttttgaactgacgcaggatgaagcggaa
gagtggtatcgtggccgcgacgtctaccctgaaacgacgccgcagcaggatgaagtcatc
gtcacgttccagggggcaacgctgggcctggcgaaaaaagtcggctcccgtttgaaaaac
agctacccgcgtgagctggttcgcgacggtaaactatttgccggtaaggcgtga
DBGET
integrated database retrieval system
