Raoultella ornithinolytica B6: RORB6_14760
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Entry
RORB6_14760 CDS
T02625
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror00470
D-Amino acid metabolism
ror00550
Peptidoglycan biosynthesis
ror01100
Metabolic pathways
ror01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RORB6_14760 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RORB6_14760 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RORB6_14760 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ror01011
]
RORB6_14760 (ddl)
Enzymes [BR:
ror01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RORB6_14760 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
ror01011
]
Precursor biosynthesis
Amino acid ligase
RORB6_14760 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATPgrasp_YheCD
TTL
ATP-grasp
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
AGJ87633
LinkDB
All DBs
Position
complement(3233736..3234656)
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AA seq
306 aa
AA seq
DB search
MADKIAVLFGGTSAEREVSLNSGTAVLAGLREAGVDAHPVDPRDVDVTRLKALGFKKAFI
ALHGRGGEDGTLQGLLELIQLPYTGSGVMASAISMDKVRSKLLWQGAGLPVAPWVALTRA
QFNAGLSAEVEQQIAALGLPLIVKPACEGSSVGMSKVSENCALHNALALAFQHDEDVLIE
KWLSGPEFTVAIVGEEILPSIRIQVAGTFYDYEAKYLSDETQYFCPGCEDPARESEIQAL
VVKAWNVLGCKGWGRIDVMLDSDGQFYLLEANTSPGMTSHSLVPMAARQAGMSFSQLVVR
ILDLAG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaatcgcggttcttttcggcggtacctctgctgagcgcgaagtgtcgctc
aattcagggactgcggtactggcgggcctgcgtgaagctggcgtggatgcgcaccctgtc
gatccgcgcgacgtggatgttacccggttgaaagcgctgggctttaagaaagcgtttatt
gcgttgcatggtcgcggtggcgaagatgggacgttgcaggggctgctggagctgattcag
ctgccttacaccggcagcggcgtgatggcgtcggcgatttccatggacaaagttcgcagc
aaattgttgtggcagggcgcgggattaccggtcgctccatgggtcgcgctgacgcgtgcg
cagttcaatgctggcctgtctgctgaagttgaacagcagattgccgcactgggtctgccg
ctgattgttaaaccggcttgcgaaggctcgagcgtcggcatgtcgaaagtcagcgaaaat
tgtgcattacataatgcattggcgctggcttttcagcatgatgaagatgttctgattgag
aaatggcttagtgggcctgaattcaccgtcgctatcgtcggtgaagaaattttaccgtca
attcgtatccaggtggctggaaccttctatgattatgaggcgaagtatctctctgatgag
acgcaatatttctgcccaggttgtgaagatcctgcccgcgagtcagaaattcaggccctg
gtagttaaagcctggaatgttctcggttgtaaaggttgggggcgtattgatgtgatgctg
gacagcgatggccagttttatttgctggaagcaaatacttcccctggcatgaccagccac
agcctggtgccgatggcggcgcgtcaggccgggatgagcttctcgcagcttgttgttcga
attctggacctggcggggtga
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