KEGG   Roseomonas sp. FDAARGOS_362: CTJ15_20360
Entry
CTJ15_20360       CDS       T05160                                 
Name
(GenBank) DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
ros  Roseomonas sp. FDAARGOS_362
Brite
KEGG Orthology (KO) [BR:ros00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CTJ15_20360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ros03400]
    CTJ15_20360
Enzymes [BR:ros01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CTJ15_20360
DNA repair and recombination proteins [BR:ros03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CTJ15_20360
SSDB
Motif
Pfam: LigD_N
Other DBs
NCBI-ProteinID: ATR22428
UniProt: A0A2D2H8T4
LinkDB
Position
3491327..3491926
AA seq 199 aa
MTDSDPLARYRQKRDFRQTPEPEGAIRHGGRHEGLFVVQKHDATRLHYDFRLELDGVLKS
WAVTRGPSLDPEEKRLAVEVEDHPLDYGGFEGVIGSGYGAGTVMLWDRGSWEPLSEDPAA
DLAGGRLHFRLHGTRLKGGWHLVLMRGRGRGTRRNWLLIKDRDEEARPGSGDALLREATT
SVLSGRDLAQIATGAPGRG
NT seq 600 nt   +upstreamnt  +downstreamnt
atgacagacagtgacccgctcgcccgctatcgccagaagcgcgatttccggcagacgccg
gaacccgagggggcgatccgccacggcgggcggcacgagggtctcttcgtggtgcagaag
cacgacgccacgcggctgcactacgacttccgcctcgaactggatggcgtgctgaagtcc
tgggcggtgacgcgcggccccagcctcgatccggaggagaagcgcctcgcggtggaggtg
gaggaccatcccctcgactatggcggcttcgagggggtgatcggcagcggctacggcgcc
ggtacggtcatgctctgggaccgcggaagctgggagccgctttcggaggacccggcggcg
gatctggcaggggggcgcctgcatttccgcctgcacggcacgcgcctgaagggcggctgg
cacctcgtgctgatgcgcggacgcgggcgtgggacgcgccggaactggctgctgatcaag
gaccgcgacgaggaggcccggcccggctccggcgatgcgctgctgcgcgaggccacgacc
tcggtcctgtccgggcgcgacctggcgcagatcgcgacgggcgcgccggggcgcggatga

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