Roseomonas sp. FDAARGOS_362: CTJ15_20360
Help
Entry
CTJ15_20360 CDS
T05160
Name
(GenBank) DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
ros
Roseomonas sp. FDAARGOS_362
Brite
KEGG Orthology (KO) [BR:
ros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CTJ15_20360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ros03400
]
CTJ15_20360
Enzymes [BR:
ros01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CTJ15_20360
DNA repair and recombination proteins [BR:
ros03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CTJ15_20360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_N
Motif
Other DBs
NCBI-ProteinID:
ATR22428
UniProt:
A0A2D2H8T4
LinkDB
All DBs
Position
3491327..3491926
Genome browser
AA seq
199 aa
AA seq
DB search
MTDSDPLARYRQKRDFRQTPEPEGAIRHGGRHEGLFVVQKHDATRLHYDFRLELDGVLKS
WAVTRGPSLDPEEKRLAVEVEDHPLDYGGFEGVIGSGYGAGTVMLWDRGSWEPLSEDPAA
DLAGGRLHFRLHGTRLKGGWHLVLMRGRGRGTRRNWLLIKDRDEEARPGSGDALLREATT
SVLSGRDLAQIATGAPGRG
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgacagacagtgacccgctcgcccgctatcgccagaagcgcgatttccggcagacgccg
gaacccgagggggcgatccgccacggcgggcggcacgagggtctcttcgtggtgcagaag
cacgacgccacgcggctgcactacgacttccgcctcgaactggatggcgtgctgaagtcc
tgggcggtgacgcgcggccccagcctcgatccggaggagaagcgcctcgcggtggaggtg
gaggaccatcccctcgactatggcggcttcgagggggtgatcggcagcggctacggcgcc
ggtacggtcatgctctgggaccgcggaagctgggagccgctttcggaggacccggcggcg
gatctggcaggggggcgcctgcatttccgcctgcacggcacgcgcctgaagggcggctgg
cacctcgtgctgatgcgcggacgcgggcgtgggacgcgccggaactggctgctgatcaag
gaccgcgacgaggaggcccggcccggctccggcgatgcgctgctgcgcgaggccacgacc
tcggtcctgtccgggcgcgacctggcgcagatcgcgacgggcgcgccggggcgcggatga
DBGET
integrated database retrieval system