Roseivivax sp. THAF197b: FIV09_06130
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Entry
FIV09_06130 CDS
T06253
Symbol
ykoU
Name
(GenBank) putative ATP-dependent DNA ligase YkoU
Organism
rot
Roseivivax sp. THAF197b
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID:
QFS82400
UniProt:
A0A5P8YZ20
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Position
complement(1201365..1202963)
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AA seq
532 aa
AA seq
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MKDFAALFTAVDQTTKTTLKTKALAEYFRTAPDTDKLWTIALFSGRRPKRAVNTTQLREW
AAERAGIPLWLLEESYPIVGDLAETIALVLPDAKIHEDRPLTDWILKLKSLSQVDIAERK
TRILDAWARLDTTERFLFNKLITGGFRIGVSQKLMTRALAQATGQEEAVLAHKLMGKWTP
DDITYHALIEADDPAADASRPYPFYLAYQLDDGPVDIGPPEEWQAEWKWDGIRGQLLIRG
SEHHVWSRGEELMTDRFPELARARDYLPEGTVLDGEIVAWNAEDEIPLPFNTLQARIGRK
TVPKKLLKDAPVILLAYDVLEADGRDLRDTPMADRRARLDRMLGQLPAEAPIRPSRLIDF
DTWDVLAETRAQAREMRAEGVMLKRKDSPYLSGRKKGDWWKWKLDPLTIDAVMIYAQQGH
GRRANLFTDFTFAVWDGDALVPFTKAYSGLTDAEFRKITAWVRKNTQQRFGPVRQVTPHH
VFEIAFEGIHESPRHKSGVALRFPRMSRWRQDKPLAEANTLDDLKAILAAYG
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggatttcgcagcactcttcaccgccgtggaccagaccacgaagaccaccctcaag
accaaggcgctggcggagtatttccggaccgcgcccgataccgacaagctctggaccatc
gcgcttttctcgggccgacgcccgaaacgtgcggtcaacacgacccagctgcgcgaatgg
gcggcggagcgcgcaggcattccgctttggctgctggaggaaagctatcccattgtcggc
gatcttgccgagacgatcgcgcttgtgcttccggatgcgaaaatacatgaagaccgtccg
ctaaccgactggatactcaagcttaagtcgctgtctcaggtggatatcgcggagcgcaag
acgcgcatcctcgatgcatgggcccggctcgatacgaccgagcgcttcctcttcaacaag
ctcattaccggaggtttccggatcggggtcagccagaagctgatgacccgcgccctggcg
caggccaccgggcaggaagaggccgttctggcccataaactcatgggcaaatggaccccg
gacgacatcacctatcacgcgctcatcgaagcagacgaccccgccgcggatgcctcgcgc
ccctacccgttctacctggcctaccagcttgacgacggccccgtggatatcggcccgccg
gaagagtggcaggcggagtggaaatgggacggcattcgcggtcagcttctgatccgcggc
agcgaacaccacgtctggtcgcgcggcgaggagctgatgaccgaccgcttccccgaactt
gcccgcgcgcgggactacctgcccgagggcaccgtgctcgacggcgagatcgtggcctgg
aatgccgaggacgaaatcccgctccctttcaataccttgcaggcccgcattggccgcaag
accgtgccgaagaagctgctgaaagacgcgcccgtgatcctgctggcctatgacgtgctg
gaagcggacggccgggacctgcgcgatacgcccatggcggatcggcgcgcgcgacttgac
cggatgctgggccaattgcccgccgaggccccgatccgcccctcccgtctgatcgacttc
gatacctgggacgtgctcgccgagacccgtgcccaggcgcgggagatgcgcgcggaaggt
gtcatgctgaaacgcaaggacagcccctatctgtcgggccgcaagaagggcgattggtgg
aaatggaagctcgatccgctcaccattgatgcagtgatgatctatgcccagcagggccac
ggccgccgcgccaatctcttcaccgatttcaccttcgcggtctgggatggcgacgcgctc
gtaccgttcacgaaggcctattccggcctgaccgacgcggaattccgcaagatcacggcc
tgggtgcgcaagaacacccagcaacgcttcggcccggtgcggcaggtcacgccgcaccat
gtcttcgagatcgccttcgaaggcattcacgaaagcccacggcacaaatccggcgtggcg
ctgcggtttccccgcatgtcccgctggcggcaggacaaaccgctggccgaagcgaacacg
ctggacgatctgaaggccatcctcgccgcctatggatga
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