Roseivivax sp. THAF197b: FIV09_09665
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Entry
FIV09_09665 CDS
T06253
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rot
Roseivivax sp. THAF197b
Pathway
rot03030
DNA replication
rot03430
Mismatch repair
rot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIV09_09665 (polC)
03430 Mismatch repair
FIV09_09665 (polC)
03440 Homologous recombination
FIV09_09665 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rot03032
]
FIV09_09665 (polC)
03400 DNA repair and recombination proteins [BR:
rot03400
]
FIV09_09665 (polC)
Enzymes [BR:
rot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIV09_09665 (polC)
DNA replication proteins [BR:
rot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FIV09_09665 (polC)
DNA repair and recombination proteins [BR:
rot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FIV09_09665 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QFS83091
UniProt:
A0A5P8Z277
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All DBs
Position
1929341..1930717
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AA seq
458 aa
AA seq
DB search
MGTLRGRILLLFAVVLATSLAAAALALRIALSEGSIAAFAAMGFLLLAILTAAWFVLDQA
VAQPVDRLAAALRVHAHNSDAPALDPRLAGHLGDLGDAAETVTRALTDARRRTAEVIAHE
TRALTTERQRLTDILTEIPVATILASDSHTIALYDGQAAEVLAQIGTPRLNAPLSDYFTE
ECLARAQRKLGKTGLGIETKLDGIRGALSFSARIKPMDQGGYLILIDAADAIIAPDANRP
LIYDFALLTDRPAGAIEDQPLADLTYCVFDLETTGLLPHRDAVLQIGALRVMRGQIVEGE
RFDLLVDPGRPIPPASSRVHHITDSMVRGKPTITDAAPRFHDFARETVLVAHNAPFDLAF
LKARRTETGLDWSHPVIDTVLVSAILFGTTEKHTLDALCDRLGITIAPELRHTALGDARA
TADALCRMLPMLAGRGIETFGDYLAEARRHGRLIADMN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgttgcgcggtcgcatcctcctgctcttcgcggtggtgctggccacgtcgctg
gccgccgcagcgctcgctctgcgcattgcgctgagcgaaggcagcattgccgccttcgcc
gccatggggtttctgctgctggcgatcctgaccgcggcctggttcgtgctggatcaggcg
gtggcacaaccggtggaccggctggccgcggctctgcgcgtgcatgcccacaattccgac
gcgcccgccctcgatccgcgccttgcggggcatctcggcgatctgggcgatgccgccgaa
accgtgacccgcgccttgacggatgcccggcgccgcacggccgaggtcatcgcgcatgag
acccgcgccctgaccacagaacgccagcggctcaccgatatcctgaccgaaattcccgtg
gccaccatcctggccagcgacagccacacgatcgcgctctatgacggtcaggctgccgag
gtcttggcccagatcggcacgccgcgcctgaacgcgccgctttcggattatttcaccgaa
gagtgccttgcgcgagcgcagcgcaaactgggcaagaccggcctcgggatcgagacgaaa
ctggacggcatccgcggcgcgctcagcttcagcgcgcggatcaaacccatggatcagggc
ggttacctgatcctgatcgatgcggcggatgccatcattgcgcccgacgccaaccgcccg
ctcatctacgatttcgcgctgctgacggatcgtcccgcaggcgcgatcgaagatcagccc
ctcgcggatctgacctattgcgtcttcgatctggagacgacgggcctcctgccccatcgc
gatgcggtgctccagatcggcgcgctgcgtgtgatgcgcgggcagatcgtggagggcgag
cgcttcgatctcctcgtcgatcccggacgtcccattccgcccgcatcgagccgcgtgcat
cacatcaccgacagcatggtgcgcggcaagccgaccatcaccgacgccgcgccgcgcttt
cacgactttgcccgcgagaccgtgcttgtcgcgcataacgcgcccttcgatctcgcgttt
ctgaaagcgcgccggaccgagacgggcctcgactggtcacatcccgtcatcgacacagtg
ctggtctccgccattttgttcggcacgaccgaaaagcacacgcttgatgcgctctgcgac
cgtctgggcatcaccatcgcccccgagctgcgccacaccgccttgggagatgcgcgggcc
acggcagacgcgctctgccggatgctgcccatgcttgcagggcgcgggatcgagacgttc
ggcgattacctcgccgaagcgcggcgccacgggcggctgatcgccgacatgaactga
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