Rhizobium oryzihabitans: G3A56_13000
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Entry
G3A56_13000 CDS
T06770
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
roy
Rhizobium oryzihabitans
Pathway
roy01501
beta-Lactam resistance
roy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
roy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
G3A56_13000
01503 Cationic antimicrobial peptide (CAMP) resistance
G3A56_13000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
roy02000
]
G3A56_13000
01504 Antimicrobial resistance genes [BR:
roy01504
]
G3A56_13000
Transporters [BR:
roy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
G3A56_13000
Antimicrobial resistance genes [BR:
roy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
G3A56_13000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QIB38803
UniProt:
A0A7L5BJ74
LinkDB
All DBs
Position
M15-11:complement(2553496..2556585)
Genome browser
AA seq
1029 aa
AA seq
DB search
MAHFFIRRPVFAWVIAIVIMLGGALAIATLSISQYPDIAPTTVRVSATYNGASAETVEKS
VTTIIEDGMTGLDDLTYMTSSSSTGSAEVTLTFGNSILPDIAQVQVQNKLQLVQSQLPDT
VQQRGIQVSRSTSSILMVGALISTDGKRNSADLGDVFSSRVEDQIKRLEGVGSINVFGSE
YAMRIWLDPFKLNKYQLTTADVTSAIESQNTQVSVGSLGAVPAVKGQQLNVTVTAQSQLT
TVADFESVILKVVKDGSTVRLSDVARIEIGQETYGGDSRSNGRPSAGFAVNLATGANALD
TAARVKSALSAVEGSLPEGVSIEYPYDTTPFVQLSIEKVVHTLIEAIILVFVVLLVFLQN
LRATFIPMIAVPVVLLGTFGILALTGYSINTLTMFAMVLAIGLLVDDAIVVVENVERIMS
EEGLSPVEATEKSMGEITGAIIGIALVLTAVFIPMAFFGGSTGIIYRQFSITIVSAMLLS
AVVAIVLTPALCATMLKPIDHHKKQRGPGAWFNRGFGKTTDGYVSSIGYLLKRPLRVMIL
FAIVIGGCAWFFSKLPSSFLPQEDQGVLLTIIQTPTGSNIERTNEVVKQVENYFREKEAN
NVESVFGVLGFSFSGSGQNNAIVFTKLKDFADRTAPDQHAAAIVQRAMGTFFGFRDAQVF
PLLPPAIQGMGTSSGFSMYLVDSGRNGTEALTATSKELIALATSNPKVSSLRSDSQDNET
QMKIILDQEKMGAMGVDLSSVNLMLSTIFAGRDVNDFTLNGELKPVYVQGDAPYRMQPDD
LKFWYARNTSGEMVPFSSFSEVKWINAPPSLARYNGTGAISLEGTAGAGVASGDAMDEME
RLTASLPGGYTVAWQGISYQERLSGSQAPMLYALSVLIVFLCLAALYESWSIPFSVIMAV
PVGVLGALTAAHFFGQTNDVYFKVGLLTTIGLAAKNAILIVEFAKERQEHGLSLLEATLE
AAKLRLRPIIMTSLAFILGVVPLAIATGAGSAAQNAIGIGVLGGMLSATLLGIFFVPSFF
VIIRRLSRR
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcccatttctttatcaggcgccccgttttcgcatgggttatcgccatcgtcatcatg
ctgggcggcgcattggcaattgcgacgctctccatctcgcaatatcccgatattgcaccg
acgacggtgcgcgtcagcgcgacctataacggcgccagcgccgaaaccgtcgaaaaatcg
gtgacgaccatcatcgaggacggcatgaccggcctcgacgatctcacctatatgacctcg
tcatcctcaaccggcagcgccgaagtgacgctgaccttcggcaacagcattctgcccgat
atcgcgcaggttcaggtgcagaacaagctgcagctcgtccagtcgcaattgcccgacacc
gtgcagcagcggggtattcaggtcagccgctccacatcgagcatcctgatggtgggtgcg
ttgatttcgaccgacggcaagcgcaattcggccgatctcggcgacgtgttctcctcgcgc
gtcgaagaccagatcaagcgcctcgagggcgtgggcagcatcaacgtcttcggctccgaa
tatgcgatgcgcatctggctcgatccgttcaagctcaacaagtaccagctgacgacggcc
gatgtgaccagcgccatcgaaagccagaacacccaggtttcggtcggttcccttggcgcg
gtgcccgcggtcaaaggccagcagctgaacgtgacggtgacggcgcagagccagctcacc
acggttgccgatttcgaatcggtcatcctgaaagtcgtaaaggacggctcgaccgttcgt
ctcagcgacgtcgcacgcatcgaaatcggccaggaaacgtatggcggcgattcccggtcg
aacggccgtccttctgccggtttcgcggtcaacctcgccacgggtgccaacgcgctcgat
acggcagcgcgtgtaaagtcggcgctttccgccgttgagggttcgctgcccgaaggcgtt
tcgatcgaatatccctatgacacgacacctttcgtgcaattgtcgatcgagaaggtggtc
cacacgctgatcgaagcgatcatcctcgtcttcgtcgtgcttctggtgttcctgcagaat
ctgagagccacattcattccgatgattgcggtgcccgtcgtgcttctcggcaccttcggc
atcctcgcactgacaggatattcaatcaacaccctcaccatgttcgccatggttctcgcc
atcggccttctcgtcgacgacgccatcgtcgttgtcgaaaacgtcgagcgcatcatgtcg
gaagaggggctctcgccggtcgaggcaaccgaaaagtcgatgggtgaaatcaccggcgcg
atcatcggcatcgcgctcgtgctgacggccgtcttcattccgatggccttcttcggcgga
tctacgggtatcatctatcgccagttctcgatcaccatcgtttcggcaatgctgctttcg
gcagtggtcgccatcgttctgacgccggcgctttgcgccacgatgctgaagccgatcgat
catcacaagaagcagcgcggaccgggtgcctggttcaaccgcggcttcggcaagacgacg
gacggctacgtctcctccatcggctatctgctgaagcggcccctgcgcgtgatgattctc
ttcgcgatcgtgatcggcggctgcgcctggttcttttccaagctgccaagctcgttcctg
ccgcaggaagaccagggcgttcttctgacgatcattcagaccccgacgggttcgaatatc
gagcggaccaacgaggtggtgaagcaggtcgaaaactacttccgcgaaaaagaagccaac
aatgtcgaatccgttttcggcgtgcttggtttcagcttcagcggttccggccagaacaac
gccatcgtcttcaccaagctcaaggatttcgccgatagaacagcaccggatcagcacgca
gccgccattgtgcagcgtgcgatggggacattctttggtttccgcgatgcacaggtgttt
ccgcttttgccgccggccattcagggcatgggcacgtcgagcggtttctcgatgtatctc
gtggatagcggccgtaacggcaccgaggcactgactgcaacgtccaaggaactgatcgcg
cttgcgactagcaatccgaaggtcagctcgctcagaagcgacagccaggacaacgaaacg
cagatgaagatcattctcgatcaggaaaagatgggggccatgggcgtcgatctttcctcc
gtgaacctgatgctgtcgacgatctttgccggccgggatgtcaacgacttcaccctgaac
ggcgagctcaagccggtctatgttcagggcgatgcgccctaccgcatgcagccggacgac
ctgaagttctggtatgcccgcaacaccagcggcgagatggtacctttctcttccttcagc
gaagtgaagtggatcaacgcgccgccgtcactggcacgctacaacggcacgggcgcgatc
tcgcttgagggcaccgccggcgcgggcgtcgcttccggtgacgccatggatgaaatggaa
cgcctgacggcaagcctgccgggcggttacacggtggcatggcagggtatttcctatcag
gaacgcctttccggctcgcaggctccgatgctttatgcgctgtcggttctgatcgtgttc
ctttgccttgcagcgctttacgaaagctggtcgatcccgttctcggtcatcatggccgtg
ccggtcggcgttctcggcgccctgaccgcggcccatttcttcggccagacgaacgacgtc
tacttcaaggtgggcctgctgacgaccatcggccttgccgcgaaaaacgcgatcctgatc
gtcgaattcgccaaggaacggcaggagcacggcttgagtcttttggaagcgacactggag
gcggcgaagctgcgtctgcgcccgatcatcatgacatcgctcgccttcatcctgggtgtt
gtacctctcgcgatcgcaaccggagcgggttcagccgcgcaaaatgcaatcggtatcggg
gtgctgggtggtatgctttctgcaacactcctcggaattttcttcgttccatcctttttc
gtcatcattcgtcgcctttcaaggcgttaa
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