Rhodopseudomonas palustris BisB18: RPC_1871
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Entry
RPC_1871 CDS
T00336
Name
(GenBank) Hydrophobe/amphiphile efflux-1 HAE1
KO
K18138
multidrug efflux pump
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc01501
beta-Lactam resistance
rpc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RPC_1871
01503 Cationic antimicrobial peptide (CAMP) resistance
RPC_1871
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpc02000
]
RPC_1871
01504 Antimicrobial resistance genes [BR:
rpc01504
]
RPC_1871
Transporters [BR:
rpc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RPC_1871
Antimicrobial resistance genes [BR:
rpc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RPC_1871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
ABD87428
UniProt:
Q217K8
LinkDB
All DBs
Position
2036778..2039918
Genome browser
AA seq
1046 aa
AA seq
DB search
MSRFFIDRPIFAWVIAITIMLGGLLALRSLPVAQYPQIAPTTVRITGSYPGADAQTVENS
VTKVIEQGMTGIDNLDYMTSTSTSTGQSQITLTFTSAANPDVAQMQVQNKLQLVTALLPQ
IVQSTGLSVTKSSTGFLMVIGFVSTDGKLSSIDLADYVNSTLNDTLKRIGGVGDTQLFGS
GYAMRIWLNPDKLAKYALMPSDVEAAIQAQNTQVSAGQLGGLPARAGQQLNATVTARSRL
QTAEQFRNIILKSATDGSLVRLNDVAEVELGAESYTTSAAYNGMPAAGLAVNLATGANAI
STAEAVQSTIARLSTTFPQGVTVVYPYDTTPFVRLSIEEVVKTLIEAIVLVFVVMFVFLQ
NIRATIIPTIAVPVVLLGTIGILSIFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
QEEGLSPKQATRKSMDEITGALIGIATVLSAVFVPMAFFGGSVGVIYRQFSITIVSAMVL
SVIVALILTPALCATILRTPEAHATGTGLFGWFNRTFDRGASAYRRGAQGIIARSLRFGL
VFVALTVAMGVMFLRLPNSFLPQEDQGILITSVQLPVGATQDRTLRVLEQVRDYYATQEK
DAVDSVFTTAGFGFSGQGQNIGIAFIRLKPFAQRKAAAVSAQAVAGRAMRAFSKFKDGRI
FALAPPAIQGMGTSNGFDFYLQDINGAGHAKLIETRNALLAKAAQSKQLANTRPNGQEDE
PQFSVAIDQEKASALGVGLADINATLSTAWGSDYVNDFIDRGRVKKVYLQSGKDFRMQPD
DLGRWYVRNSAGLMVPFSAFASGHWSFGSPRLERYNGSSAVEIQGEAAAGISSGTAMDEI
DTLVSQLPAGYGHEWTGLSAQERLSSNQAASLYAISVVVVFLCLAALYESWAIPLGVMLA
VPIGIFGALLAALVFGQTNDVYFKVGLLTTIGLAAKNAILIIEFALERQASGLPLVEATL
DAARQRLRPILMTSFAFILGVTPLAIASGAGSGAQNSIGIGVMGGMIAATVLGIFFVPLL
FVTVRRLFKGKAANAASTGEPANEQA
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgttttttcatcgaccggccgatcttcgcctgggtgatcgccatcaccatcatg
ctcggcggtctgctggcgctgcgcagcctgccggtggcgcaatatccgcagatcgcgccg
accacggtacggatcaccggcagctatcccggcgccgacgcccagaccgtggagaactcg
gtcaccaaggtgatcgaacagggcatgaccgggatcgacaatctcgactacatgacctcg
acctcgacctccaccggccagtcgcagatcacgctcactttcaccagcgccgccaatccc
gacgtcgcgcagatgcaggtgcagaacaagctgcagctggtcaccgcgctgttgccgcag
atcgtgcagagcaccgggctgtcggtcaccaaatcctccaccggcttcctgatggtgatc
ggcttcgtctccaccgacggcaagttgtcgtcgatcgatctcgccgattacgtcaacagc
acgctgaacgacaccttgaagcggatcggcggcgtcggcgacactcaactgttcggctcc
ggttacgcgatgcggatctggctcaacccggacaagctcgccaaatacgcgctgatgccg
agcgacgtcgaggccgcgatccaggcgcagaacacccaggtctcggccggtcagctcggc
ggcctgccggcccgcgccggccagcagctcaacgccaccgtcaccgcgcgcagccggctg
cagaccgccgagcagtttcgcaacatcatcctgaagagcgccaccgacggctcgctggtg
cggctcaacgacgtcgccgaggtcgaactcggcgccgaaagctacaccacgagcgcggcc
tataacggcatgccggcggccggcctcgcggtcaatctggcgaccggcgccaacgccatc
agcaccgcggaagccgtgcagtccaccatcgcccggctgtccaccacctttccgcagggg
gtcaccgtggtctatccctacgacaccacgccgttcgtgcggctgtcgatcgaagaggtg
gtgaagacgctgatcgaggcgatcgtgctggtgttcgtggtgatgttcgtgttcctgcag
aacatccgcgccaccatcatcccgaccatcgcggtgccggtggtgctgctcggcaccatc
ggcatcctgtcgatcttcggttactcgatcaatacgctcaccatgttcgcgatggtgctg
gcgatcggcctgttggtcgacgacgccatcgtcgtggtggagaacgtcgaacgggtgatg
caggaggaggggctgtcgccgaagcaggcgacccgcaaatcgatggacgagatcaccggg
gcgctgatcggcatcgccaccgtgctgtcggcggtgttcgttccgatggcgtttttcggc
ggttcggtcggggtgatctaccggcaattctccatcaccatcgtgtcggcgatggtgctg
tcggtgatcgtcgccttgatcctgacgccggcgctgtgcgccaccatcctgcgcacgccg
gaggcgcatgccaccgggacggggttgttcggctggttcaaccgcaccttcgatcgcggc
gcgagcgcttatcgtcgcggcgcccagggcatcatcgcgcgctcgctgcggttcggcctg
gtgttcgtggcgctgacggtggcgatgggcgtgatgttcctgcggctgccgaattcgttc
ttgccgcaggaggaccagggcatcctgatcaccagcgtgcagctgccggtcggcgccacc
caggaccgcacgctgcgggtgctggagcaggtccgcgattactacgcgacgcaggagaag
gacgccgtcgacagcgtgttcaccaccgccggctttggcttttccgggcagggccagaat
atcggcatcgcgttcatcaggctgaagccgttcgcacagcgcaaggccgccgcggtgtcg
gcgcaggccgtcgccggccgcgccatgcgggcgttcagcaagttcaaggacggccggatc
ttcgcgctggcgccgccggcgatccagggcatgggcacctcgaacggcttcgacttctat
ctgcaggacatcaacggcgccggccatgccaagctgatcgagacccgcaacgccttgctg
gcgaaggcggcgcagagcaagcaactggccaacacccgtcccaacggccaggaggacgag
ccgcaattttccgtcgccatcgatcaggagaaagccagcgcgctcggcgtcgggctcgcc
gatatcaacgccacgctgtcgaccgcctggggcagcgactacgtcaacgacttcatcgat
cgcggccgtgtcaagaaggtctatctgcaatcgggcaaggatttccggatgcagccggat
gatctcggccgctggtacgtgcgcaattccgcgggtctgatggtgccgttctcggcgttc
gcctccgggcactggagcttcggctcgccgcggcttgagcgctacaacggctcctccgcc
gtcgagatccagggcgaggccgccgccggcatcagctccggaacggcgatggacgagatc
gacacgctggtcagccaattgccggcgggctacggccacgaatggaccgggctgtcggcg
caggagcggctgtcgagcaaccaggccgcctcgctctatgcgatctcggtggtggtggta
ttcctctgtctggcggcgctgtatgaaagctgggcgattccgctcggcgtgatgctggcg
gtgccgatcggcatcttcggcgcgttgctggcggcgctggtgttcggccagaccaacgac
gtctatttcaaggtcgggctgttgacgacgatcggtctggcggcgaagaacgccatcctg
atcatcgaattcgcgctggagcggcaggcgtcgggcttgcctctggtcgaggcgacgctg
gatgcggccagacaacgcttgcggccgatcctgatgacgtcgttcgccttcatcctcggc
gtcacgccgctggcgatcgcctcgggcgccggctccggcgcgcagaattcgatcggcatc
ggggtgatgggcggcatgatcgccgcgaccgtgctcggcatcttcttcgtgccgctgttg
ttcgtcacggtgcgccggctgttcaagggcaaggcggcgaatgcggcttcgaccggcgag
cctgccaatgagcaggcgtaa
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