Rhodopseudomonas palustris BisB18: RPC_1963
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Entry
RPC_1963 CDS
T00336
Name
(GenBank) sigma54 specific transcriptional regulator with GAF sensor, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rpc
Rhodopseudomonas palustris BisB18
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpc03000
]
RPC_1963
Transcription factors [BR:
rpc03000
]
Prokaryotic type
Helix-turn-helix
Other families
RPC_1963
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
GAF
MimR_N
AAA_lid_14
HTH_8
Sigma54_activ_2
AAA_5
PAS
HTH_17
PAS_4
PAS_8
HTH_30
HTH_28
AAA_2
Mg_chelatase
HTH_1
HTH_29
HTH_20
HTH_23
HTH_7
HTH_psq
AAA
HTH_22
HTH_IclR
AAA_3
Xre-like-HTH
SLU7_N
PAS_7
Motif
Other DBs
NCBI-ProteinID:
ABD87520
UniProt:
Q217B6
LinkDB
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Position
complement(2134431..2136374)
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AA seq
647 aa
AA seq
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MTDARNPGDAAGRHARRLLNRGEIPPPGLLNTTVSRSWERCLKSGLEPLAGPATPDPVSP
PQLKQALEQRREWLRQARPIVEYLYSQVSGSGSMVILADDQGLLIEALGDAEFLKRAERV
ALQPGACWHEQDRGTNAIGTALAERAPVAVHGSEHFLDCNRFLTCTAAPVMGSDGKLLGV
IDISGHHSARHPHTLGLVQIASHMIESRVFELWHEGATRLRLHPQAEGIGTLADGLLALD
EDGRIVGANRTALNLLGLADIEIGHVGIDGVLALASDGLLQQARRHPGAVLNAETRSGRR
LFVRAEPGRSLAPSALPRRTAPARDALAELDTGDERMRQCLERARKVVGKPIPILLQGES
GVGKELVAAAIHASGPRQKRAMVAVNCAALPEHLIEAELFGYAPGAFTGARREGSPGRIR
EADGGTLFLDEIGDMPLSLQSRLLRVLQERQVVPLGGGKPTTVDFALIAASHRPLKLEVE
HGRFRADLYYRLNGITLTLPSLRTRSDFPVLMSRLLERFEPGAGLLVEPSVVAALAEYSW
PGNLRELANVLRFASALLDPGETVIGWQHLPEDLVDELRRPQRARPDNCAGLPSLRAASD
SLIERALHNSAGNLSEAARRLGISRTTLYRRIGGDHRRSVRVSREVP
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgcccggaatccgggagacgccgcgggtcgccatgcgcgacgtctgctgaac
cggggcgaaatcccgccgccgggtctgctcaacaccaccgtcagccgctcctgggagcgc
tgtctgaagtccggcctcgaaccgctggccggaccggcgacgcccgacccggtgtcgccg
ccgcagctcaaacaggcgctggaacagcggcgcgaatggctgcgccaagcccgacctatt
gtcgaatacctttacagccaagtcagtggctcgggcagcatggtgatcctggccgacgac
cagggcctgctgatcgaagcgctcggcgatgcggagtttctcaagcgggccgagcgggta
gcgctgcagccgggcgcctgctggcacgagcaggaccgcggcaccaacgccatcggtacg
gcgctggccgagcgggcgccggtggcggtgcacggcagcgagcacttcctcgactgcaac
cgcttcctcacctgcaccgccgccccggtgatgggcagcgacggcaagctgctaggcgtg
atcgacatttccggccaccacagcgcccgccacccgcacacgctggggctggtgcagatc
gccagtcacatgatcgagagccgggtgttcgagctgtggcacgaaggggcgacgcggttg
cgactgcatccgcaggccgagggcatcggcaccttggccgatgggttgctggccctcgat
gaggacggccgcatcgtcggcgccaatcggaccgcgctcaacctgctggggctggcggac
atcgagatcggccatgtcggcatcgacggcgtactcgcgttggcctcggacgggctgctg
caacaggcccggcggcaccccggagccgtgctcaacgccgagacgcgctctggccggcgg
ctgttcgtcagggccgaaccgggacgatcgctcgcgcccagcgccctgccccgccggaca
gccccggcgcgcgacgcgctagccgaactggacaccggcgacgagcggatgcggcaatgc
ctggagcgcgcccgcaaggtggtgggcaagccgatcccgatactgctgcagggcgaatcc
ggggtcggcaaggagctggtggccgccgcgatccacgcctccggcccgcggcagaaacga
gccatggtggcggtcaattgcgcggcgctgccggagcatctgatcgaagccgagctgttc
ggctatgcccccggcgccttcaccggagcccgccgcgagggctctccggggcggatccgc
gaggccgatggcggcacgctgtttctcgacgaaatcggcgacatgccgctgtcgctgcag
agccggctgttgcgcgtgctgcaggagcgccaagtggtgccgctcggcggcggcaagccg
accacggtcgatttcgcgctgatcgccgccagccaccggcctttgaagctcgaagtcgag
catggccggtttcgcgccgatctctactaccgcctcaacggcatcaccctgacgctgccc
tcgctgcgaacgcgtagcgactttcccgttctgatgagccgcctgctcgagcgcttcgag
cccggcgccggattgctggtcgagccgagcgtcgtagcggcgctggcggagtattcctgg
cccggcaatttgcgcgagctggccaacgtgctgcgcttcgcctcggcgctgctggacccc
ggcgagacggtgatcggctggcagcatctgccggaggatctggtcgacgagctgcggcga
ccacagcgggcgcggccggacaactgcgcgggcttgccgtcgctgcgggcggcctcggat
tcgctgatcgagcgcgcgctgcacaacagcgccggcaacctctccgaagccgcccgccgg
ctcggcatcagccgcaccacgctctatcgccgcatcggcggcgaccaccgccgcagcgtc
agggtcagccgtgaggtgccgtga
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