Rhodopseudomonas palustris BisB18: RPC_2189
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Entry
RPC_2189 CDS
T00336
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00300
Lysine biosynthesis
rpc00550
Peptidoglycan biosynthesis
rpc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RPC_2189
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RPC_2189
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpc01011
]
RPC_2189
Enzymes [BR:
rpc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RPC_2189
Peptidoglycan biosynthesis and degradation proteins [BR:
rpc01011
]
Precursor biosynthesis
Amino acid ligase
RPC_2189
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ABD87743
UniProt:
Q216E3
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All DBs
Position
2385505..2387040
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AA seq
511 aa
AA seq
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MRRGLVALKAPGPLDVGCSNAPDWINMKLRELFSDDVAIAAEASEIEVRGVASDSRAVLS
GEVFFALAGANTDGARYIDQAIANGAVAVVGEQFPDSDHRVALVRVANPRRALALAAARM
FPRQPATIAAVTGTSGKTSVAAFTRQIWQRLGFAAASIGTIGLVTPQRSVYGSLTTPDPI
ALHREIDQIAGEGVTHLALEASSHGLDQFRLDGVRVSAAGFTNLSRDHMDYHPDVAHYLA
AKLRLFTDLVIDGGAAVISADHEHSEAVIAAARARGLRLITVGRNGNRQDGIRLIGATID
GFAQRLTVEFRGRERGLRLPLVGEFQIENALVAAGLAIGTGGDAEQVFAALQHLEGAKGR
LELVGDRNGAPIFVDYAHKPDALAKALQALRPYAKRKLIVVFGAGGDRDAGKRPLMGAIA
TGLADSVIVTDDNPRSEDPAAIRAAIMAAAGGAVEIGDRAEAIRTAIGALQSGDALLIAG
KGHETGQIIGGRVLPFSDHEAAAAALSSSAA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
ttgcgccggggtctggttgcgctaaaagctccgggaccgttggacgtcggttgttcgaat
gcgccggactggatcaatatgaagctccgcgagcttttcagcgatgatgttgcgatcgcg
gccgaggcctcggaaatcgaggtccgcggcgtcgcgtcggacagtcgcgcggtgctgtcc
ggcgaggtgttcttcgcgctcgccggcgccaacaccgatggcgcgcgctatatcgaccag
gcgattgccaatggcgcggtcgcggtcgtcggcgagcagtttcctgactccgaccatcgc
gtcgcactggtgcgcgtggccaatccgcggcgcgcgttggctttggccgcggcgcgcatg
tttccgcggcagccggcgacgattgccgcggtcaccggcaccagcggcaagacctcggtg
gcggcgttcacaaggcagatctggcagcggctcggctttgccgccgccagcatcggcacc
atcggcctggtcaccccgcaacgcagcgtctatggctcgctgaccacgccggacccgatc
gcgctgcatcgggagatcgaccagatcgccggcgagggcgtcacgcatttggcgctggaa
gcttcgtcgcacgggctcgatcagttccggctcgatggcgtcagagtctccgccgcgggc
ttcaccaatctgtcgcgcgaccatatggattaccatcccgacgtcgcgcattacctcgcg
gccaagctgcggctgttcaccgatctggtgatcgacggcggcgccgcggtgatttccgcc
gatcacgaacattccgaagcggtgatcgccgcggcgcgcgcgcgcggtctgcggctgatc
acggtgggccgcaacggcaatcgccaggacggcatccggctgatcggggcgaccatcgac
ggtttcgcgcagcggctgaccgtcgaattccgcggccgcgagcgtggcctgcggctgccg
ctggtcggcgaattccagatcgagaacgcgctggtcgcggccgggctggcgatcggcacc
ggcggcgatgccgagcaggtgttcgcggcactccagcatctcgaaggcgccaagggccgg
ctcgaactggtcggcgacagaaacggcgcgccgatcttcgtcgactacgcgcacaagccg
gacgcgttggcgaaagccttgcaggcgctgcgaccctacgccaagcgcaagctgatcgtg
gtgttcggcgccggcggcgaccgcgacgccggcaagcggccgctgatgggcgcgattgcc
acgggactggccgacagcgtcatcgtcaccgacgacaatccgcgcagcgaggatccggcg
gcgatccgcgccgcgatcatggcggcggcgggcggcgcggtggaaatcggcgaccgcgcc
gaggcgatccgcaccgcgatcggcgcgctgcagagcggcgacgcgctgctgatcgccggc
aagggccacgagaccggacaaatcatcggcggccgggtgctgccgttcagcgatcacgag
gccgccgcggcggccctttcatcgagcgccgcatga
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