Rhodopseudomonas palustris BisB18: RPC_2781
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Entry
RPC_2781 CDS
T00336
Name
(GenBank) Carbamoyl-phosphate synthase L chain, ATP-binding
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00280
Valine, leucine and isoleucine degradation
rpc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RPC_2781
Enzymes [BR:
rpc01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
RPC_2781
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
HlyD_3
Biotin_lipoyl_2
ATP-grasp_3
GARS_A
ATPgrasp_ST
DUF3182
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
ABD88329
UniProt:
Q213V7
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All DBs
Position
complement(3018318..3020321)
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AA seq
667 aa
AA seq
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MARSALYRRFRTLLIANRGEIACRVIRTARAMGLRTVAVYSEADRGALHVAEADEAVLIG
EARARDSYLDIARVIAVAKQSGAEAIHPGYGFLSESAEFAQACADAGIVFVGPTAAMITA
MGSKSGSKQLMEQAGVPLVPGFHGEAQDEATLADAANSIGYPVLVKASAGGGGRGMRVVH
TANELSAAIVSAKREAKAAFGDDRMLIERYVTNPRHIEVQVVGDSHGNLVSLFERECTLQ
RRHQKVIEEAPSPTLSPAQRETVCAAARKAAAAVNYVGAGTIEFVSDGRDVFFIEMNTRL
QVEHPVTELITGIDLVEWQLRVAFGEKLPLAQDEIKLNGHAIEARVYAENPQKNFMPSVG
TIKTWRTPPQTHGLRIDAGYRQGDSVSPYYDAMLAKVIAFAPSRDAALDRLARGLDDTDI
RGVVTNTAFLAALLTHPDVRANAIDTGFIARELAALTPAAAEPGDLELCAAVAAILVEED
KAVHREPASPWRTAGWMPVGRRARVFAFRHGAAEHRVTLRYGSGPAELAIGDRTFDFSTA
ARDDGGFDLTLDGARSHVVAVIEGHELYLRSRNGRFDLHWVDPFGGDDEEHVGEDRIVAP
LPGTVVALLAEQGATLEKGAAILTLEVMKMEQTLRAPFAGVLTHLKCKVGDIVQEGVELA
EIEPSAA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggtccgcgctgtaccgtcggtttcgcacgctgctgatcgccaaccgcggcgag
atcgcctgccgggtgatccgaaccgcgcgcgccatggggctgcgcaccgtggcggtgtat
tccgaagccgaccgcggtgcattgcatgtggctgaggccgacgaggcggtgctgatcggc
gaggcgcgggcgcgcgacagctatctcgacatcgcgcgcgtcatcgctgtcgccaagcag
agcggcgccgaagcgatccatcccggctacggctttctgtcggagagcgcggagttcgcg
caggcctgcgccgatgctggaatcgtgttcgtaggcccgaccgccgcgatgatcaccgcg
atgggctccaagtccggttcgaagcagctgatggaacaagccggtgtaccgctggtgccg
ggttttcacggcgaagcccaggacgaggccacgctggcggacgcagctaacagcatcggc
tatccggtgctggtgaaagcctcggcgggcggcggcggccgcggcatgcgggtagtgcac
accgcaaatgaactcagcgccgcgatcgtcagcgccaagcgcgaggcgaaagccgcgttc
ggcgacgaccgcatgctgatcgagagatacgttacaaacccccggcacatcgaggtgcag
gtggtcggcgacagccacggcaacctggtgtcgctgttcgagcgcgaatgcactttgcag
cggcggcaccagaaggtgatcgaggaggcgccgtcgccgaccttgtcgccggcgcagcgc
gagacggtctgcgccgcggcgcgcaaggccgccgccgcggtgaactacgtcggcgccggc
accatcgaattcgtctccgacggccgcgacgtcttcttcatcgagatgaacacgcgactg
caggtcgagcatccggtcaccgagttgatcaccggcatcgacctggtcgaatggcaactc
cgtgtcgcgttcggcgagaagttgccgctcgcgcaggacgagatcaagctgaacggccac
gccatcgaggcgcgggtctatgcggagaatccgcagaagaacttcatgccctcggtcggc
accatcaagacctggcgcacgccgccgcagacccacggcttgcggatcgacgccggctat
cggcagggcgatagcgtgtcgccctattacgacgcgatgctggccaaggtgatcgccttc
gcgccgagccgcgacgccgcgctcgaccggctcgcgcgcgggctcgacgacaccgacatc
cgcggcgtggtcaccaatacggccttcctcgccgcgctgctgacgcatcccgacgtgcgc
gccaacgcgatcgataccggcttcatcgcgcgcgagttggcggcgctgacgccggcggcg
gcggagcccggcgatctcgaactgtgtgcggcggtggcggcgatcctggttgaggaagac
aaggccgtgcatcgcgagccggcctcgccatggcggaccgcgggctggatgccggtcggt
cgccgcgcccgggtgttcgcgttccgccacggcgccgccgagcaccgggtgacgctgcgc
tacggcagcgggccggcggagcttgcgatcggcgatcggacttttgacttcagcaccgcc
gcgcgtgacgacggcggcttcgacctgacgctggacggcgcgcgcagccatgtcgttgca
gtgatcgagggccacgagctctatctgcgcagccgcaacggccgcttcgacctgcattgg
gtcgatccgttcggcggcgacgacgaggagcatgtcggcgaggaccgcatcgtggcgccg
ctgccgggcaccgtggtggcgctgttggccgagcagggcgcgaccctagagaagggcgcg
gcgatcctcacgctggaagtgatgaagatggagcagacgctgcgcgcgccgtttgccggc
gtgctgacccatctgaaatgcaaggtcggcgacatcgtccaggaaggcgtcgaactcgcc
gagatcgagccttcagccgcgtga
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