Rhodopseudomonas palustris BisB5: RPD_0504
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Entry
RPD_0504 CDS
T00345
Name
(GenBank) 3-isopropylmalate dehydratase, large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00290
Valine, leucine and isoleucine biosynthesis
rpd00660
C5-Branched dibasic acid metabolism
rpd01100
Metabolic pathways
rpd01110
Biosynthesis of secondary metabolites
rpd01210
2-Oxocarboxylic acid metabolism
rpd01230
Biosynthesis of amino acids
Module
rpd_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
RPD_0504
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
RPD_0504
Enzymes [BR:
rpd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
RPD_0504
4.2.1.35 (R)-2-methylmalate dehydratase
RPD_0504
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Motif
Other DBs
NCBI-ProteinID:
ABE37742
UniProt:
Q13DU7
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All DBs
Position
complement(577127..578539)
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AA seq
470 aa
AA seq
DB search
MSAAKPTTLYDKIWNDHLVHEAEDGTCLLYIDRHLVHEVTSPQAFEGLRTAGRKVHSPEK
TLAVVDHNVPTTDRSKPNPDPESAEQIAALAENARDFGVTYYNEHDKRQGVVHVIGPEQG
FTLPGTTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMRVTVDGDLPD
GVTAKDIILAIIGEIGTAGGTGYVLEYAGDAIRALSMEGRMTVCNMSIEGGARAGLIAPD
EKAYAYLKGRPMAPTGANWDAAMRYWDTLRSDEGAHFDHELRLDAAALPPIVTWGTSPED
VISITGRVPNPADIADEAKRLSKERALAYMGLTPGTRITDIKIDRMFIGSCTNGRIEDLR
AAAKVAEGKTVNGNVSAMIVPGSGLVKEQAEAEGLDKIFVKAGFEWREPGCSMCLAMNPD
KLAPEERCASTSNRNFEGRQGFKGRTHLVSPAMAAAAAIAGHFVDIREWR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgcaaagcccaccacgctgtacgacaagatctggaacgaccatctggtgcac
gaggccgaggacggcacctgcctgctctatatcgaccggcatctggtgcacgaagtgact
tcgccgcaggcgttcgaggggctgcgcaccgccggccgcaaggtgcattcgccggagaag
acgctggcggtggtcgatcacaacgtgccgaccaccgatcgctccaagcccaatcccgat
ccggagagcgccgagcagatcgccgcgctcgccgagaacgcccgcgatttcggcgtcacc
tattacaacgaacacgacaagcggcagggcgtcgtccacgtcatcggcccggagcagggc
ttcacgctgcccggcaccaccatcgtctgcggcgacagccacacctcgacgcatggcgcg
ttcggcgcgctggcgcatggcatcggcacgtctgaagtggagcacgtgctggcgacccag
acgctgatccagaaaaaggccaagaacatgcgcgtgaccgtcgacggcgatctgccggac
ggcgtcaccgccaaggacatcatcctggcgatcatcggcgagatcggcaccgcgggcggc
accggctacgtgctggaatatgccggcgacgcgatccgcgcgctgtcgatggaaggccgc
atgacggtctgtaacatgtcgatcgaaggcggcgcccgcgccggcctgatcgcgccggac
gagaaggcgtatgcctacctgaagggtcgcccgatggcgccgaccggcgccaattgggac
gccgcgatgcgctactgggacacactgcgttccgacgagggcgcgcatttcgaccacgag
ctccggctcgacgccgcggcgctgccgccgatcgtcacctggggcaccagccccgaggac
gtgatctcgatcaccggtcgcgtgccgaacccggccgacatcgccgacgaagccaagcgg
ctctcgaaggaacgcgcgctggcctatatgggcctgacgccggggaccaggatcaccgac
atcaagatcgatcgaatgttcatcggctcctgcaccaacgggcggatcgaggatctgcgc
gctgccgccaaggtcgccgagggcaagaccgtcaacggcaatgtcagcgcgatgatcgtg
ccgggctcgggtctggtgaaggagcaggcggaggccgaaggcctcgacaagatcttcgtc
aaggccggcttcgaatggcgcgagccgggctgctcgatgtgcctcgcgatgaatcccgac
aagctcgcgccggaagagcgctgcgcctcgacgtcgaatcgcaatttcgaaggccgtcag
ggcttcaagggccgcacccatctggtgtcgcccgcgatggccgccgcagccgcgatcgcc
ggccatttcgtcgacatccgcgagtggcgctga
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