Rhodopseudomonas palustris BisB5: RPD_0591
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Entry
RPD_0591 CDS
T00345
Name
(GenBank) DNA helicase, putative
Organism
rpd
Rhodopseudomonas palustris BisB5
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTES_1575
AAA_12
AAA_11
AAA_30
AAA_19
nSTAND3
Viral_helicase1
DUF559
GreA_GreB
ResIII
AAA_16
UvrD_C_2
UvrD-helicase
SLFN-g3_helicase
PhoH
ATPase
DEAD
RuvB_N
AAA
Motif
Other DBs
NCBI-ProteinID:
ABE37829
UniProt:
Q13DL0
LinkDB
All DBs
Position
664209..669098
Genome browser
AA seq
1629 aa
AA seq
DB search
MKGVEERRGGADETPALRLSELLDYVEQVIKLDERPTFRLSEYRLANGQTFTFHEHEFHA
LPGITHDLTDDDGAIWLSIERLKRNDPPTPPDRSVPWIELSPDPEKTPITRGHVLITVPK
AECDAFVASGRARAEDCAESLAVGAKGQFDIRLRLEDWPEIATEIEDYISQSWLPWSVAE
RPRRRSIALYQKLFEVAQISEMGGAEQAIELVWGIGLSRWMFEGTLIDLPLIERLVEIEI
DESAAGTIRVRPRQAPATVNLRPYDELKIDGVPMAQDAARRALSAVDEESGVSPFERDTF
ELVLRACQTQLDPGGVYLPDSERIEPTVPPPPASENLVVTDRWVVAARKRSDNFLLQDIA
NLKHAIELSPADLPGPSRTLVMGPAPSRSNRWGALPGSLGGASESTVADEPSAPLGDLFF
PKPFNDEQVEIVRRLEENDGVVVQGPPGTGKTHTISNIICHYLALGRRVLVVSHGEPALS
VLRDQLPPEVRDLAISITTSEKEGFKQLEGAVRLLQSIIESIRPGEQHRLIRNLENSIIG
MRGRIAEIDAEIGRLAEKQLSAVPGSDLRPAELAAAVVASGDKYSWFVDRPAAFAADATF
DDGDFERIREARLALGARIEHLRVDLPSVADLPSGRVLANLHLDIQRTDSLNAEAAKDVS
LVLRLHSVEALEKAELAAEALDVLVDACRHLERFPFLRSICTASQLNKDDPVMQALRAFL
PEAKSVVAEHGKYLQTPVTVQDDVSPEMEDLLARCAAGDKVFGIFAFKEKAFRPAVEAIR
ILSRQPSSSEEWLHVRDYVAWRKRFTDLRLRWSRLVPELAADGVGIEAPRHLSELVDALE
DVLIVAPGIHDGLQAGLRDVAIGDTNGLWADEAKLRTIRTALRNAIAAVRLASARLEVAR
LSELFGESGGKFGRMSKSFLDEVVGRAGLPEARVEETWTKLLQAIDDLARHRSQFVTVRE
GADHLEAAGAPIWAAKLRDKAALDGQDLEMPSDWREAWDWGAAQGYLSSLDQRGALGRLT
TERSKLAETVAKSFEQLVRERTFYALASSMTGQVRAALMMFATALRKVGKGTGKGAMRHR
RDARKAMAACYDGVPCWIMPSWRVAEQLPGELGTFDLVIMDEASQSDIKEVTALLRGRKI
LVVGDDKQVSPTAAFIDNAKIERLERTFLTNQPFKTLLLPGASLYDLAKVMFPDKFVMLR
EHFRCVEPIIRFSTQFYTEALVPLRIPTTHERIDPPLVDIYVPDGKRTGDKINHREAEVV
VSEILKIVESPMLSKIGEGDRWRSIGVISLIGSKQAALINRMLLDAVGEETYMRHRIACG
DSATFQGNERDIVLLSMVADPAHKQSQTALHFEQRFNVAMSRARDRLYLVRSVREEELKP
EDLKAKVLRHFRDPMKGSQRPAGDLASLCDSDFERAVLNRLVDRGYRVTPQVGAMGFKID
LVVEGVGDRRLAIECDGDKYHGPEKWADDMSRQRVLERVGWRFWRCWASSFTVDPDGCMA
DLFRILDANGIQPAPAEFPPERYAEQRVADARNESKAKSDEVGVAGVRSESGIKIGDSIV
VRYLDDNKTSSFVLSRDRHDPVNGLIGADTAFGKQILGFSEEDEIEVEDAGRSRRLLIVR
AAKEGIRLH
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
ttgaagggagtagaggaacgccgagggggggccgacgaaacgcccgcattgcgcctctcg
gaattgctcgactacgtcgagcaggtgatcaagctggacgagcggccgacgttcagactc
tccgagtatcgcctcgccaatggccagaccttcacgttccacgaacatgaatttcatgca
ctcccgggcatcacgcacgatctgaccgacgacgacggcgcaatttggctgagcatagag
cgcctcaaacggaacgatccacctacgcctcccgatcgttcggtgccttggatcgagctt
tcaccggatcccgaaaagacgccaattacacgcggccacgtgctgatcaccgtgcccaaa
gccgaatgcgatgcattcgtggcctcggggcgggcccgcgcggaggattgcgccgagtct
ttagcggtcggcgcgaaaggtcagttcgacatccggttgcggctggaagattggccggag
atcgcaacggagatcgaggattacatctcgcaatcttggttgccgtggtccgtcgcagag
cggccgcggaggcggtcgatcgctctctatcaaaagcttttcgaggttgctcagatctcc
gagatggggggcgcggaacaagcgatcgagttggtctgggggatcggtctttcgcgctgg
atgttcgaagggacgttgatcgacctcccgctgatcgagcgattggtagagatcgagatc
gacgaaagcgcggcgggcaccatcagggtgcgcccaaggcaggcgccagcgaccgtgaac
ctgcggccctacgacgaactcaagattgacggcgtccccatggcgcaggatgccgcccgg
cgggcgctttcggcagtcgacgaggagtcgggcgtaagcccgttcgagcgcgacaccttc
gaactggttctgcgggcgtgccagacgcaactggatccggggggcgtctaccttcccgac
agcgagcgcatcgagcccacagtgccgccgcctccggcgtcagaaaacctggtcgtcacc
gaccgctgggtcgtggcggcgcggaagcgatccgacaacttccttctccaggacattgcg
aacctcaagcacgcaatagaactttcgcccgccgaccttcccggaccatcacgcactttg
gtgatgggtccggcgccgtccaggtccaatcgctggggcgcgctgccgggctcgttggga
ggcgcatccgaatcaacggtcgcagacgagcccagcgcgccgctcggcgacctcttcttt
cccaaacctttcaacgacgaacaggtcgagatcgtcagaaggctggaggagaacgatggc
gtcgtagtgcaggggccgcccggtactggcaagacgcacacgatatcgaacatcatctgc
cactatctggcgctcggtcgccgcgtgctcgtcgtttcgcacggcgagcccgcgctgtcg
gtgctgcgcgatcagttgccgccggaagtgcgtgatctggcgatcagcatcacgacgtcg
gaaaaggaaggcttcaagcagctcgaaggagccgtccgcctgctccaatcgatcatcgag
agcattcgtccgggcgaacaacaccgactgatccgaaatctggagaattcgatcattggg
atgcgtgggcggattgccgagatcgacgcggagatcggcaggctcgcggagaaacagctt
tctgccgttcctggcagcgatctgcggccagccgaactggcggccgcggtcgtcgcgagc
ggcgacaagtattcatggttcgttgaccgaccggccgcatttgcggcggatgcgaccttc
gatgatggcgacttcgagcggatccgtgaagccaggctcgcgctaggtgcacggatcgag
catctacgcgtcgacctcccgtcggtggctgatctgcctagcggccgcgtgctcgctaac
ctccacctggacatccagcgaaccgactcactgaacgcagaggccgccaaggacgtttcg
ctcgtcctgcggctgcattcagtagaagcgctcgagaaggctgagcttgcggcggaagcg
ctcgacgttctggtcgacgcctgccgccatctggaacgttttccgttcctgcgttcaatc
tgcacggcctcgcaattgaacaaggatgacccagtgatgcaggcgctgcgggcgttcctg
ccggaggcgaaatccgtcgtcgcggagcacggcaagtatttgcagaccccggtcacggta
caggatgatgtctctccggaaatggaagacttgctcgcgcgttgtgccgccggcgacaag
gtcttcggcatcttcgccttcaaggaaaaggctttccggccggccgtcgaagcaatccgc
atactctcgcgccaaccatcgagctctgaagaatggttgcacgtccgcgactacgtggca
tggcgcaagcgcttcaccgatctacgcctccgatggagcaggctggtgccagagcttgcc
gccgatggtgtaggcatagaagcgcctcgacacctctccgaacttgtggatgcactggag
gacgtgctcatcgtggcgcccggaatccatgacggccttcaggcagggctgcgtgatgta
gccatcggtgacacgaacggattgtgggccgacgaagccaagctgcggaccatccggacg
gcgctccggaatgccatcgcggcggtccggctcgcctccgccaggctagaagtggcgcgc
ctttccgagcttttcggagagagcggagggaagttcggtcgaatgtcgaagtcgtttctg
gacgaggtggtcggccgggccggccttccggaagcgcgcgtggaagagacctggacgaag
ctgctgcaggcgatcgatgacctggcccgtcaccgctctcaattcgtgactgtgcgcgaa
ggcgcggaccatctcgaagctgccggtgcccctatatgggcggccaagctacgcgacaag
gctgccctagacgggcaggatctcgagatgccttccgattggcgcgaggcatgggactgg
ggcgccgctcagggctacctgtcgtcactggatcagcgaggcgccctcggccgcctcacg
acggaacgttccaagctcgcagagaccgtcgcgaagagcttcgagcaacttgtccgcgaa
cgcacgttttacgctctcgccagctcgatgaccggccaggtccgcgcggccttgatgatg
ttcgcgaccgccttgagaaaggtaggaaagggtacgggcaagggtgccatgcgccaccgt
cgcgacgcgcgcaaggcgatggcagcctgttacgatggagtgccgtgctggatcatgcca
tcttggcgtgtcgctgagcagcttccaggcgaactgggcaccttcgatctggtcattatg
gacgaggcgtcgcagtccgacattaaggaggtgacggctctcctacgtggccgcaaaatc
cttgtcgtaggagacgacaaacaggtcagcccgaccgccgccttcatcgacaatgcgaaa
atcgaaaggcttgagcgcaccttcctgaccaatcagccgttcaagacgttgctgctgccg
ggggcgtcgctgtacgaccttgccaaggtgatgtttcctgacaaattcgtcatgctgcgc
gagcacttcaggtgcgtcgagccgatcatcaggttctcgacacagttctacactgaggcg
cttgttccgctgcgtatcccaacgacccatgagcgcatcgatcctcccctggtagacatc
tacgtgcccgacggcaaacgaacgggcgacaagatcaatcatcgggaggcggaggttgtc
gtctcggagattcttaaaatcgtcgaaagcccgatgctatcaaagataggagagggtgat
cgttggcgcagcatcggcgtaatctcgctgatcggttcgaaacaggcagccttgatcaac
cgtatgctgctcgatgccgttggcgaggagacgtacatgcgccacaggatcgcctgcggc
gacagcgcgacattccagggcaacgagcgcgatatcgtcttgctttccatggtggcggat
ccggcgcacaagcagtcgcagaccgctctccacttcgagcagcgcttcaacgtcgccatg
tcccgcgcacgggatcggctctacttggtgaggtccgtccgcgaggaggagctcaaacct
gaggatttgaaggcgaaagtccttcggcatttccgggacccgatgaagggcagccaacgt
cccgcgggcgatctggcttcattgtgcgattccgacttcgagcgggccgttcttaatcga
ctcgtcgaccgcggatatcgcgttaccccgcaggtcggtgccatggggttcaagatcgac
ctcgtggtcgaaggcgtcggggatcgccggctggcgatcgaatgcgatggcgacaaatac
cacggcccggaaaaatgggccgacgacatgtcgaggcagcgcgtactggaacgcgttggc
tggcgcttctggcgctgctgggcatcgagcttcaccgtcgatccggatggctgcatggcc
gaccttttccggatattggacgcaaacggcattcagccggcgcccgccgagtttccgccg
gagcgctatgccgagcagcgggtcgcggatgcgaggaacgaatccaaggcaaaatcggac
gaagtcggcgtggcgggggtgcggtccgagagtggcattaagattggggacagcatcgtc
gtgcgctaccttgatgataacaagacgagcagcttcgtgctgagccgggacaggcacgac
cccgttaacggtttgatcggtgcggataccgcgtttggaaagcaaatactcggcttcagc
gaggaagacgagatcgaggtcgaggatgcaggccggagccgtcgtctgctaatagtgcgg
gccgcaaaagagggcatccggttgcactag
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