Rhodopseudomonas palustris BisB5: RPD_1237
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Entry
RPD_1237 CDS
T00345
Name
(GenBank) DNA-3-methyladenine glycosylase I
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RPD_1237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpd03400
]
RPD_1237
Enzymes [BR:
rpd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
RPD_1237
DNA repair and recombination proteins [BR:
rpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RPD_1237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
HhH-GPD
TfoX_C
Motif
Other DBs
NCBI-ProteinID:
ABE38475
UniProt:
Q13BR4
LinkDB
All DBs
Position
complement(1401768..1402421)
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AA seq
217 aa
AA seq
DB search
MTAARLHDDGLTRCPWPGDDPLYVAYHDNEWGVPEYDDRALFEKLILDGFQAGLSWITIL
RKRNNFRRAFDDFDPAKIARYDAAKIQELMNDVGIVRNRAKIEGAIGSAKAWLKIQEEGP
GFSKLLWDFVGGAPKVNAFKTTAGVPASTPLSVKISKELSAHGFKFVGPTIVYAFMQAVG
MVNDHLVSCHCHARCGAMQRPARRSAAPARQTATRQR
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgcgcggctgcacgacgacggattgacgcgttgcccgtggcccggcgacgat
ccgctttacgtcgcgtatcacgacaatgaatggggcgtgccggaatatgacgaccgcgca
ttgttcgagaaactgatcctcgacggcttccaggccgggctgtcgtggatcacgatcctg
cgcaagcgcaacaatttccgtcgggccttcgacgatttcgatcccgcgaagatcgcccgc
tacgacgcggccaagattcaggagctgatgaacgacgtcggcatcgtccgcaaccgcgcc
aagatcgaaggcgcaatcggcagcgccaaggcgtggctgaagatccaggaagagggaccg
ggcttttcgaaattgctgtgggactttgtcggcggcgcgccgaaggtcaacgcgttcaag
accaccgcgggcgtgccggcctcgacgccgctgtctgtgaagatttcaaaggagctttcc
gcgcacggcttcaaattcgtcggtccgacgatcgtctacgccttcatgcaggcggtcggc
atggtcaacgaccatctggtgagctgccactgccatgcgcgctgcggcgcgatgcaacgg
ccggcgcgacgttctgcggcgccggcgcgtcagactgcaacacgtcagcgctga
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