Rhodopseudomonas palustris BisB5: RPD_2535
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Entry
RPD_2535 CDS
T00345
Name
(GenBank) Carbamoyl-phosphate synthase L chain, ATP-binding
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00280
Valine, leucine and isoleucine degradation
rpd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RPD_2535
Enzymes [BR:
rpd01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
RPD_2535
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
HlyD_3
Biotin_lipoyl_2
ATP-grasp_3
GARS_A
DUF3182
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
ABE39765
UniProt:
Q137H4
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Position
2837528..2839543
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AA seq
671 aa
AA seq
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MMATTALYRRFRTLLIANRGEIACRVIRTARAMGLRTVAVYSEADADALHVSEADEAVLL
GPARARDSYLSIERIIAAAKQTGAEAVHPGYGFLSESAEFAQACADAGLIFVGPTPQMIT
AMGSKSGSKALMEKAGVPLVPGYHGEAQDDATLAAAADKIGFPVLVKASAGGGGRGMRVV
RAANELGEAIVSAKREAKAAFGDDRLLIEKYVDNPRHIEVQIVGDSHGNLVSLFERECTL
QRRHQKVIEEAPSPTLDAAQRETVCEAARRAAGAVNYVGAGTIEFVSDGKDVFFIEMNTR
LQVEHPVTELISGVDLVEWQLRVAFGEALPLRQDQLTLNGHAIEARVYAENPAKNFMPSV
GRISTWRTPAETDGLRIDAGYRAGDSVSPYYDAMLAKVIAFAPTRAAAIDRLNRGLEETD
VRGVVTNIPFLSALVTHPEVRANAIDTGFIERHLAALTAAPAPVSDLELATAVAAILRAE
TDAARAEAPTPWRSSGWMPVGRRKRGFVFRHGRGHDHTDYKVQLAYGTGPATLTIDGRDL
AFASLANGDGLDVLLDGARSRVNAVVEGHELYLRTRNGRFDLHWVDPFGGESEESVGEDK
IVAPLPGTVVALLAEQGAKLEKGAAILTLEVMKMEQTLRAPFAGTLKAIKCKVGDIVQEG
VELAEIEPDAE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaacaacagccttgtaccggcggttccggacacttcttatcgccaaccgcggc
gagatcgcctgccgcgtcatccgcacggcgcgcgcgatggggttacgcacggtcgcggtg
tattccgaggccgacgccgacgcgctgcatgtgagcgaggccgacgaggccgtgctgctc
ggcccggcgcgggcgcgcgacagctatctttcgattgagcgcatcatcgccgcggcgaag
cagaccggcgccgaagcggtgcatcccggctacggcttcctgtcggagagcgccgaattc
gcccaggcctgcgccgacgccgggctgatcttcgtcggcccgacgccgcagatgatcacc
gcgatgggctcgaaatcgggctccaaggcgctgatggaaaaggccggggtgcccctggtg
ccgggctatcacggcgaggcgcaggacgatgcgacgctggcggctgcggccgacaaaatc
ggcttcccggtgctggtcaaagcctcggccggcggcggcgggcgcggcatgcgcgtcgtg
cgcgcggcgaacgagctcggcgaagcgatcgtcagcgccaagcgcgaggccaaggcggcg
ttcggcgacgaccgtctgctgatcgagaaatacgtcgacaatccgcgccacatcgaggtc
cagatcgtcggcgacagccacggcaatctggtgtcgctgttcgagcgcgaatgcacgctg
cagcggcgccaccagaaggtgatcgaggaggcgccgtcgccgacgctcgacgccgcgcag
cgcgagacggtttgcgaggcggcgcggcgcgcggccggcgctgtgaactatgtcggcgcc
gggacgatcgaattcgtctccgacggcaaggacgtgttcttcatcgaaatgaacacgcgc
ctgcaggtcgagcatccggtaaccgaactgatctccggcgtggacctcgtggaatggcag
ctgcgcgtcgccttcggcgaggcgctgccgttgcgacaggaccagctcacgctgaatggt
cacgccatcgaggcgcgggtctatgcggagaatccggcgaagaacttcatgccgtcggtc
gggcggatctcgacctggcggacgccggccgagaccgatggcctgcggatcgacgccggc
tatcgcgccggcgacagtgtgtcgccctattacgatgcgatgctcgccaaggtgatcgcc
ttcgcgccgacgcgtgcggcggcgatcgaccggctcaatcgcgggctggaggagaccgac
gtccgcggcgtcgtcaccaacatcccattcttgtcggcgctggtgacgcatccggaggtg
cgcgccaatgcgatcgataccggcttcatcgagcggcatctcgcggcgctgaccgcggct
ccggcgccggtgtccgatctggagctcgcgacggcggtcgccgcgatcctgcgggccgag
accgacgccgcgcgggccgaagcgccaacgccgtggcgcagctccggctggatgccggtc
ggccgtcgcaagcgcggcttcgtgttccggcatgggcgcgggcacgaccacaccgactac
aaggttcagcttgcctatggcacggggccggcgacgctcaccatcgatggccgcgatctc
gccttcgcctctctggccaatggtgacgggctcgatgtcctgctcgatggcgcccggtcg
cgcgtcaacgcggtcgtcgaagggcacgagctctatctgcgcacgcgcaacggtcggttc
gacctgcactgggtcgatccgttcggcggggagagtgaggagagcgtcggtgaggacaag
atcgtcgcgccgctgcccggcaccgtggtcgctctgctcgccgaacagggcgccaagctc
gagaagggcgcggcgatcctgacgctggaagtgatgaagatggagcagaccctgcgcgcg
ccgttcgcgggaacgctcaaagcgatcaagtgcaaggtcggcgacatcgtccaggaaggc
gtcgaactcgccgagatcgaaccggacgcggagtga
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