Roseovarius pelagicus: N7U68_05935
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Entry
N7U68_05935 CDS
T09340
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rpel
Roseovarius pelagicus
Pathway
rpel00300
Lysine biosynthesis
rpel00550
Peptidoglycan biosynthesis
rpel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpel00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
N7U68_05935
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
N7U68_05935
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpel01011
]
N7U68_05935
Enzymes [BR:
rpel01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
N7U68_05935
Peptidoglycan biosynthesis and degradation proteins [BR:
rpel01011
]
Precursor biosynthesis
Amino acid ligase
N7U68_05935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
UXX84190
LinkDB
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Position
complement(1010878..1012377)
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AA seq
499 aa
AA seq
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MSAGQDKSLAELGLTAQGGTGAGAQVRITGLAVDSRQVRDGTLFAALPGTRVHGGEFIQY
ALRQGASAVLTDAEGARIAADELAASDAALVIAQDPRQTLAYAAALWFGLQPEVMVAVTG
TNGKTSVASFTRQIWSELGHAAINLGTTGVEGDYTAPLAHTTPEPITLHRVLAEAARAGV
DHAAMEASSHGLEQRRLDGVRLAAAGFTNFTQDHLDYHADFGAYFNAKAGLFDRVLPEDG
IAVINIDDPRGSDMALIAHDRGQEVITVGRNEAADLCLQAQRFEATGQTMRFAWNGQQQQ
CTMQLIGGFQAENVLMAAGLVIAAGADPKRVFETLPHMRTVRGRMQLAATRESGAAVFVD
YAHTPGAVETAIRALRPHVMGRLIAIVGAGGDRDTAKRPLMGAAAAETADLVIVTDDNPR
SEDPATIRAAVMQGCPDATEVGDRAEAILRGVDALGPGDALLVLGKGHETGQTVGDDVLP
FDDAEQASVAVSALDGGIA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaggacaagataaatcactggcggaactggggctgaccgctcagggtggcacc
ggcgccggagcgcaggtgcgcatcaccggtctggccgtcgacagccgacaggttcgtgac
ggcacgctttttgccgcattgcctggcacacgggtgcatggtggcgaatttatccaatat
gcgttgcggcagggggcgtctgcggttctgactgatgccgagggcgcgcgcatcgccgcc
gatgaactggcggccagcgatgcagcattggtcatcgcacaggatccgcgccaaacgctg
gcctatgccgctgccttgtggtttgggcttcagcccgaggtgatggtggccgtgaccggc
accaacggtaaaacatccgtggccagcttcacccgtcagatctggtctgagctgggccat
gcggcgatcaatctgggcaccaccggcgttgagggtgattataccgcaccactggcgcac
accacgccagagccgatcaccctgcaccgagtactggcagaagccgcccgcgccggcgta
gaccacgcggcgatggaagcctccagtcacgggctggaacagcgccggttggacggtgtt
cggctggcggctgccgggttcaccaatttcacgcaggaccatctggactatcacgccgat
ttcggggcctattttaacgccaaggcggggctttttgaccgggtattgcccgaggatggc
atcgccgtgatcaacattgacgacccgcgcgggtcggacatggcgctcatcgcgcatgat
cgcggtcaggaagtgatcactgttggccgcaacgaggcagcagacctgtgtttgcaggcc
cagcggttcgaggcgacgggccagaccatgcgctttgcctggaatgggcagcagcagcaa
tgcacgatgcagttgatcggcgggtttcaggcggaaaacgtgttgatggcggctggattg
gtgatcgctgcaggggccgaccccaagcgcgtgttcgagacattgccgcacatgcgcacc
gtgcgtggacgcatgcagttggctgccacccgcgaaagcggcgcggcggtttttgtcgac
tatgcccacacacccggtgcggtcgaaacggccattcgtgcgttgcgcccccatgtcatg
ggccgcctgatcgccatcgtcggcgcgggcggtgatcgcgacactgcgaaacgtccgctg
atgggggctgcggcggcggaaacggctgatctggtcatcgtcaccgacgacaacccgcgc
agcgaagaccccgccacgatccgcgcggccgtcatgcagggatgtccggacgcgaccgaa
gtcggcgaccgcgccgaggcgatactgcggggcgttgacgcgcttgggcccggcgatgcg
ctgctggtgctgggcaagggacatgagacaggccagaccgtgggcgacgacgtgttgccc
tttgatgatgccgaacaggccagcgttgccgtgtcggcgctggacgggggcatcgcatga
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