Ralstonia pickettii 12D: Rpic12D_1127
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Entry
Rpic12D_1127 CDS
T00925
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rpf
Ralstonia pickettii 12D
Pathway
rpf03030
DNA replication
rpf03430
Mismatch repair
rpf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rpic12D_1127
03430 Mismatch repair
Rpic12D_1127
03440 Homologous recombination
Rpic12D_1127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpf03032
]
Rpic12D_1127
03400 DNA repair and recombination proteins [BR:
rpf03400
]
Rpic12D_1127
Enzymes [BR:
rpf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rpic12D_1127
DNA replication proteins [BR:
rpf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rpic12D_1127
DNA repair and recombination proteins [BR:
rpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rpic12D_1127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_16
DUF3646
AAA_18
AAA_14
AAA_30
nSTAND3
AAA_2
AAA_19
TsaE
Herpes_Helicase
PIF1
T2SSE
Mg_chelatase
AAA_assoc_2
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ACS62419
UniProt:
C6BGC0
LinkDB
All DBs
Position
1:1192153..1194354
Genome browser
AA seq
733 aa
AA seq
DB search
MSYQVLARKWRPRDFTTLVGQEHVVKALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK
SLNCVGADGQGGITAQPCGVCRACTEIDAGRFVDYIEMDAASNRGVDEMAQLLDRAIYAP
TSGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL
KQMPPGHIVSHLDRILGEEGIAHEPNALRLLAAAAQGSMRDALSLTDQAIAYSAGDVSEA
AVRGMLGAIDQSYLVRLLDALADENGAALVEIADEMAGRSLSFSGALQDLASLLQKIALA
QVVPAAVQDDWPEADDVRRLAERFDAQSVQLFYQFANLGRNELALAPDEYAGFTMTLLRM
LAFQPGQSGGDTAPPSGGGGGKRAMPLAASPAASTRPAVTATAPVAAPVARVAPVAVRPQ
PVVEAPRATDQATPPAPAPVAAVTDSQAAAPARRSPAMEALAAARQASSRGRGGAPAPAA
TPVAAPVARPAAPIAGPRPNTAAATATAAVVSAPQRREQPAAVAVPADDGPPPWDEMPGE
FASPSLEEMDAAFAGWDAASGVRPGAPEPPTGSAPIEAPAAAPAPVKTIATEPVAAATPP
DLSASSLATFDGNWPALAASLPIRGLAQQLAYQSELAAVEGATMRLRVPLPPLTDANVVE
RLEAALTEHFGTPVRVACDIGAVRATAAAVDAEQRAERQRNAEDAIATNPFVQALVRDFA
AQVVPGSIQPHAH
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagtgctcgcccgcaagtggcgcccccgcgatttcaccacgctggtcggt
caggaacacgtggtgaaagcgctcacgcatgcgctcgaacagcagcgcctgcaccacgca
tacctgttcacaggcacgcgcggtgtcggcaagacgacgctgtcgcgcatcctggcaaaa
tcgctcaattgcgtcggcgcggatgggcagggcggtatcaccgcacagccgtgcggcgtg
tgccgcgcctgtaccgagatcgatgccgggcgctttgtcgattacatcgagatggatgcc
gcctccaaccgcggcgtcgacgagatggcgcaactgctggaccgcgcgatctacgcaccc
acaagcggccgcttcaaggtctacatgatcgacgaagtgcacatgctgaccaaccacgcc
ttcaacgcgatgctgaagacgctggaagagccgcccgagcacgtcaagttcattctggcg
accaccgatccacagaaaattccggtgacggtgctgtcgcgctgcctgcagttcaacctc
aagcagatgccgccggggcacatcgtgtctcacctcgatcgcatccttggcgaagagggc
atcgctcacgagccgaacgcgctgcgtctgctcgcggccgcggcgcagggttcgatgcgc
gatgcgctgtcgctcaccgaccaggccatcgcgtacagcgccggcgacgtgagcgaagcc
gccgtgcgcggcatgctcggcgcgattgatcagagctacctcgtgcgcctgctcgatgca
ctggccgatgagaacggcgccgcgcttgtcgagattgccgacgaaatggccgggcgcagt
ctgagcttctcgggcgcgctgcaggatcttgcatccctgctgcagaagattgcgctggcg
caggtcgtgcccgccgctgtgcaggacgattggccagaggctgatgatgtacgccgcctt
gccgagcggttcgatgcgcagtccgtgcaactgttctaccagtttgccaacctgggccgc
aacgaattggcgctcgcgccggatgagtacgccggcttcacgatgacgctgctgcgcatg
cttgcgttccagcccgggcagtcgggtggggacacggcgccgccttctggcggtggcggc
ggcaagcgcgcgatgccgctggctgcatcgccagccgcatcgacgcgtccggcggttacg
gcgacggcgcctgtggcggcgccggttgctcgggttgcgccggtggccgtgcgtccgcag
ccggtggtcgaggcgccgcgagcgactgatcaggcgactccgccagcacccgcgcccgtt
gcggcggttacagattcgcaggctgcggcccccgcacgtcgctcgccggcaatggaagcg
ttggccgctgcgcgtcaggcgtcaagccgtggccgcggtggcgctcctgcgcccgccgct
acaccggttgccgctcccgtcgctcgtcctgctgctcccattgcgggcccacgtccgaat
acggctgcggctactgctactgctgccgtggtgtccgcgccgcagcgccgtgaacaaccg
gctgcagtcgccgtgcccgccgatgacggcccgccaccctgggacgaaatgccgggcgag
tttgcttcgccgtcacttgaagagatggacgccgcctttgccggctgggatgccgcttcg
ggcgtgcgtcctggtgcgcctgaaccgccaacaggttcagcaccgatcgaggcccccgca
gccgcacccgcgccggtcaagacgattgccaccgagccggtagccgctgctacgccgcct
gatctgagcgccagcagtcttgccacgttcgacggcaattggccggcgctggcagcgagc
ctgccgatccgcggtctggctcagcagctggcttaccagagcgagttggcggctgtggaa
ggtgccacgatgcgattgcgtgtaccgttgcctccgctgactgatgcgaacgtcgtcgag
cgtctggaagccgcactgacggaacacttcggcacgcccgttcgtgtggcgtgcgatatc
ggagctgtacgcgccaccgcggcggccgtcgatgccgagcagcgcgccgagcgccagcgc
aatgccgaagatgccatcgccaccaacccctttgtgcaggcgctggttcgggactttgcc
gcgcaggtcgtgcctgggtcgatccaaccgcacgcgcactga
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