Ruditapes philippinarum (Manila clam): 132714728
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Entry
132714728 CDS
T09557
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00280
Valine, leucine and isoleucine degradation
rphi01100
Metabolic pathways
Module
rphi_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
132714728
Enzymes [BR:
rphi01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
132714728
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SSDB
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Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
ATPgrasp_ST
ATP-grasp_3
RimK
GARS_A
Motif
Other DBs
NCBI-GeneID:
132714728
NCBI-ProteinID:
XP_060553630
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MNAIINPLSKFNRLSIQILQNRSFSNKASIEKILIANRGEIACRVIKTARSLGIKTVSVY
SDADRNALHVSMADEAYHIGPAAANQSYLCQDKILDVARKSGAQAIHPGYGFLSENVEFA
ELCGEKGIIFIGPPSTAIRDMGIKSTSKSIMSAAGVPIIEGYHGEDQSDSRLKQEAAAIG
YPVMIKAVRGGGGKGMRISMTESEFDEQLESARREAMKSFGDQVMLIEKFVEMPRHVEVQ
VFGDKHGNYVYLYERDCSVQRRHQKIIEEAPAPGLTEETRRAIGEAAVRAAQAVNYVGAG
TVEFIMDKDQKFYFMEMNTRLQVEHPVTEMVTGTDLVDWQIKVAAGEPLPVIQSDIKLNG
HAFEARIYAEDPNNSFMPGAGPLLHLSPPQCDRNTRIDTGVRQGDEVSVHYDPMIAKLIV
WSEDRESALRRCRSALTQYQVLGLNTNIQFLTDLAKHPEFMKGNVHTDFIPQFSQDLFPE
HVTSTTAVCQAAVAMVIQQSQKIEKEAKNTQDPFSPFSMCSSMRINQNPTRWINLLDGEK
ELKMEVVTNLDGSYIVNFAGQSYTVLANIEQSGDKTNIITIIDGVKTQASIVTVGNSLHL
FTAEGQHELKLPIPKFMLSTGEGGSLGDAVSPMPGVIEKVTVTPGTSVEKGDPLVIMIAM
KMEYVIRAPKSGIVESVFYKVGDTVQKGVALVHFQDNKSANQSDDSSKTD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaatcattaacccactgtcaaaatttaacagactctctatacagattctacag
aacagaagtttttctaacaaagcatcaatagagaagattttgattgcaaacagaggtgag
atagcttgtagagtgataaagacagctagaagtcttggtattaagactgtatctgtttac
agtgatgcagacagaaatgccctacatgtttctatggctgatgaggcttatcatatagga
cctgcagcagcaaaccagagctatctgtgtcaagataaaatccttgatgttgctaggaag
tcaggagctcaagccatccatccaggctatggtttcttgtcagaaaatgtagagtttgca
gaactatgtggggagaaaggaattatttttattggaccaccctcaacagctatcagagat
atgggaattaaaagcacatcaaaatctataatgtctgcagcaggtgtgcccattatagaa
ggataccatggtgaggaccaatcagattctagattgaaacaggaagctgctgctattggc
tacccagttatgatcaaagctgtgagaggaggaggtggaaagggtatgaggatatctatg
acagagtcagagtttgatgaacagttagaatcagcacgtagagaggccatgaaatcattt
ggtgatcaagtcatgctcattgaaaaatttgtagaaatgccaagacatgtagaagttcag
gtgtttggagacaaacatgggaattatgtgtatttatatgagagggattgcagtgttcag
agaagacatcagaaaattattgaagaagctccagcaccaggcttgacagaggagacaagg
agagctattggtgaagcagctgtacgagcagcacaggcagtgaactatgtaggggcaggt
actgtagagtttataatggataaagatcagaagttttactttatggaaatgaacacaaga
ttacaggttgaacacccagtcactgagatggtgacaggtactgatctagtagattggcaa
attaaggttgcagctggagaaccattacctgtaatacagagtgatattaagttgaatgga
catgctttcgaggcacgtatatatgctgaagatccaaacaacagttttatgccaggggct
ggacccttattacacctgtcacccccacagtgtgacaggaacacaaggatagacacaggg
gtgaggcaaggagatgaggtgtcagtacactatgaccctatgatagccaagttgatagta
tggtcagaggatcgcgagtcagctctacgaagatgtcgctcagcacttacacagtaccag
gttctaggattgaacacaaatatacagtttttaacagatctggctaaacatccagagttt
atgaaaggaaatgtgcatactgatttcatcccacagttctcacaggatctgtttccggaa
catgttaccagcacaacagctgtctgccaggcagcagttgctatggtgattcagcaatca
cagaaaattgaaaaagaagccaaaaatactcaagatccattttcaccattttccatgtgt
tcatcaatgagaataaatcagaatccaactagatggattaatttactagatggagaaaaa
gaactgaaaatggaagtagtaacaaacttagatggttcatacattgttaactttgctggt
cagagttacacagtattagctaatatagaacagtcaggggataaaaccaacatcattact
atcatagatggtgtcaaaacacaagcttctattgtaacagttggaaactcacttcatctt
ttcactgctgaaggacagcacgagttaaagttaccaataccaaagtttatgttatcaact
ggggaaggtggtagcctgggagatgctgtatcacctatgccaggggtcatagaaaaggtc
actgtcacaccaggtacaagtgtagagaaaggagacccacttgttattatgatagctatg
aaaatggagtatgtaatcagagctcctaaatccggtattgtagaatcagtattttataaa
gttggtgatacagtacagaagggtgtggcacttgtacatttccaggacaacaagtcagct
aaccaatcagatgacagcagtaaaacagactga
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