Ruditapes philippinarum (Manila clam): 132737718 Help Entry 132737718         CDS       T09557                                  Name (RefSeq) THO complex subunit 1-like   KO K12878   THO complex subunit 1 Organism rphi  Ruditapes philippinarum (Manila clam) Pathway rphi03013   Nucleocytoplasmic transport rphi03040   Spliceosome Brite KEGG Orthology (KO) [BR:rphi00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     132737718   09122 Translation    03013 Nucleocytoplasmic transport     132737718  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rphi03019]     132737718    03041 Spliceosome [BR:rphi03041]     132737718 Messenger RNA biogenesis [BR:rphi03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      132737718 Spliceosome [BR:rphi03041]  Complex C   Other components    EJC/TREX     132737718  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     132737718 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  efThoc1 Death DncV_C Motif Other DBs NCBI-GeneID:  132737718 NCBI-ProteinID:  XP_060581028 LinkDB All DBs Position Unknown AA seq 654 aa AA seqDB search MMAAPTGFDFCVARNAFNKVIHQVVDENSLEPYKKFIDSFPASEGEKRVTIDQSFRDVLR DLTSSNNGCEVYRKFICLTIDAVTADLCTPTIPFMCITDVFDVIPIDQCEDMFGLVEDKV KVWKSQIFYDTGKNFLLRMCNDLLRRLSKSQNTVFCGRIQLFLSRLFPLAEKSALNLMSQ FNLENVTLYNQAKPEQTVDKDGEKKEAETMETEDEEHKTETPIDYSLYRKFWALQDFFRK PSQCYEKKLWSTFLTNSDSVFEAFASSKLDDMKSSKKKVDQRRNLEPDAFFAKYLTSEKL LNLQLNDSNFRRYVLVQFLIIFQYLSAPVKFKGQAHTLSDEQCNWIKSSSERIYQLIKET PPDGEQFAKTVEHILEREEHWNRWKNDGCPDFEKKLTDDAKKQQRRAKRRRIGDDLQASG GKVIKMGHPELTRLWNLNPNNMNACKSDDRVFLPTLEDFFQEAIEQNDPEAQVEEEYKLT NDQTFQWKALRLLARRSPQFFTNSATPAQDLKSYLNGMLSKIAKQLPNQQSEEMKTDVED EEGIKESQDDEDMKSTEQVKEEMESKEIVLNKHIIRCVAEKVGKDWKKVAVELGFPEDDI AFFESEDLTDADTGAKILTIWMEEDPDKHSAAALRVALTEVGLQDVANSLTGPS NT seq 1965 nt NT seq  +upstreamnt  +downstreamnt atgatggcggcgcccacaggatttgatttctgtgtcgcaagaaatgcatttaataaagtc attcatcaagttgtagatgaaaactcattggaaccatataagaaatttattgacagcttt ccagcaagtgagggtgagaagagggtgactattgaccagtctttcagagacgttttaaga gaccttacaagttctaacaatggttgtgaggtatacagaaaattcatttgtctcacaatt gatgctgttacagcagacctgtgtactcctacaataccatttatgtgtataacagatgta tttgatgttatacccattgaccaatgtgaggacatgtttggtctggttgaagataaggtc aaggtttggaaatctcaaatattctatgatacagggaagaatttcttgctgcgaatgtgc aatgatttgttacgacgtttatcaaagtctcaaaatacagtgttttgcggaaggattcaa ctatttttatccaggttattccctcttgcagaaaagtcagcattaaatctgatgagtcag tttaacctagagaatgtgacgttgtacaatcaagctaaacctgaacaaactgtagacaag gatggagagaaaaaagaagcagaaactatggaaacagaagatgaagaacataaaacagag acacctatagactacagtttgtacagaaagttctgggcattacaagatttctttaggaag ccaagtcaatgttatgagaaaaaattatggtcaacatttctgacaaattcagattcagta tttgaagcatttgccagttcaaaacttgatgacatgaaatcgtccaagaagaaagttgat cagagacgaaatctagaaccagatgctttctttgctaaatatctcactagtgaaaagttg ttgaatcttcagttgaatgacagtaatttcaggagatatgttttggtacaattcctcatt atattccagtatttaagtgcccctgtcaagtttaaaggtcaagctcatacactgagtgat gaacaatgtaactggataaagtcatcttcagagaggatttatcagttaattaaagagact ccacctgacggggaacagtttgccaagactgtggaacatatactagagagggaggaacac tggaacaggtggaaaaatgatggttgtcccgattttgagaaaaaacttacagatgatgca aagaaacaacaaagaagagcaaaaagacgtcgtataggagatgatttacaggcaagcggt ggtaaagtcattaaaatgggtcatccggaactaacaagactttggaatctaaatcccaat aatatgaatgcttgtaaatcagatgacagggtatttttaccaacattggaagattttttc caggaagcaatagagcagaatgatcctgaagctcaagttgaagaggagtacaagttaaca aatgatcagacatttcaatggaaggcattaagactgctggcgagacgtagtccacagttc ttcacaaattctgccacaccagcccaggatctcaaatcttatctcaatggaatgttgtct aaaattgcaaaacaattaccaaatcagcaaagtgaagaaatgaagactgacgttgaagat gaagaaggtattaaagaaagtcaagacgatgaagatatgaaaagtactgaacaagttaaa gaagagatggagagtaaagaaatagttttaaacaagcatataatacgatgtgtggctgag aaagttggcaaagattggaagaaggtggcagtagaacttggctttcctgaggatgatata gctttctttgagagtgaagatcttactgatgctgacactggagctaaaatacttactatc tggatggaggaagaccctgacaaacattctgctgcagcactgagggtggcattgacagag gtcgggcttcaagatgttgccaatagtctgactggaccatcctga

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