Ruditapes philippinarum (Manila clam): 132740158
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Entry
132740158 CDS
T09557
Name
(RefSeq) FRAS1-related extracellular matrix protein 1-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132740158
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Big_9
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
132740158
NCBI-ProteinID:
XP_060583990
LinkDB
All DBs
Position
Unknown
AA seq
2187 aa
AA seq
DB search
MGLPMRRARICVLFLACIWPGLVSAGLVVRTNAITVKVGRTVYLNTDDIVIKNMKRRDEV
CRIEVIQKDPITQRVGKLEPKIFDCSYQPNTVKYIHDGSPFLNEDRIKLRVHRFTSRKTV
TETFYLGVKVSNASTEIVVTRGLRHVIVPEFNGISNTIDASVLRFYHSRSPNVSCTVTFD
NSTHWPLVGHVIMGDQRTPVESIKTSCQEFLYMELRYEHLQKPTPDVDYFPLSIELHDPE
NIDEFKTERFFLPIYIKNALLNSPPRSSYKSMYMTDIDQFILSTIIPGIISAEDYETPDH
LLIYNISKPSSPDQGYFVHLDDQTTEVTSFLQDDLENHRIAYQPPNISFSERKIYEVEFK
VYDSHFAESMPIVLHIAIRPSSSNAPRVSLNTGLVLLEGQSREISTNNLQIVDNNNPNDI
RVYIIGGLQHGELVLNNEVISYFTISDLVQGNVKYVHDDGESERDFIQLRISDGKKDTVV
KFPITIIPKDDKPPYVVNNLGIELNEGQTKRIEPSDLLAHDPDSIDMTITYVITQPTAAG
EMIRKTRASDTGTRVNRFTQRELVKGQIFYRHFGREDFHDEFLFTLRDQQDPPNESVLET
FYIAINPVNENPPQLSPEATRLIRVSETEIARITKSELEYTDTETGSDRLTYIITTPPHF
VYSNRRNKREDAGRVIAMHNSTMQSKNNNISPVTTFKQEDINHLRIGYMPPMKDIGPDPR
LVRFVYTVQDSSGNKVLGQQFDIDIQPVNDKAPEFQSSKMLVEEGGILGISTNHIFAVDV
DTNEADLTFILEGLPNHGRLQKGGNNLLEKDTFSMLDLRKKDLRYIHDGSEVPRDSFTLS
LTDGINRVSKVFQVEIILVDDEAPKVKENLKPHLIVSEGSEAVINSNVLSATDEDTDEGT
LVFLIVKQPKYGILQLNGEPVTKFTQDDVSRGSVHYIHSSGEIGSQIIKDSVAFIVSDQH
YKASADLPKYHLNITITPVDNQKPIIIAGMPIVVDEGMKFSLSPDYITAKDPDTEPESIQ
FVITSQPQYGYLENIKPNPGSEKSNAGHPVRTFKLQDIIDKSINYVQATHKGVEPTVDRF
EFYATDGKLNSFSHTAMIAIRPTNDEEPDVMLNDFTVAEGGSRVIDRSMVDAIDMDKPKE
RIMLSISQPPEHGDIVVMLHTPNGDIEAAVNEFSASELHQGMKLKYIHDGSEHYTDKFAI
TVSDGKHEIKKVCNVTVEPINDERPEIIKNAGLTMDYGEKAVLSSVVLQSVDLDNTDDQI
YYIIVTVPKKGVLQFCNNPNEGMYSNKCRDIWVGHNFTQGDINNNRVRYLHTTGMSGSEF
DNFMFILTDGQNKRHAETFQIKVLNSKRANIALINNGIDVVEGERAVISTVSLSASDEST
RAEEIVFAVIRPPNLGQLEYIDRNLIGISSFTQMDLASGKLVYNHLTKTDFTEDSFTFTV
TNGMSDTKDSEFVIRIEPLDKELPSLVANELVEVLQGAEIPLTANKLKADDPDTDSSNVT
FLIAKQPTFGRLYNRGVYITSLFTQNAIDRGFITYESDGSHTGLDNFLFTLSDGKHDGFL
INGTLQLQPVFCSIYTKPLVNDAPKLITNQHPEVLEVFEDGRYGFQLNNNVLKAVDSDTM
NTNLVYVIEQRPKHGHLENTEAKRYVRRRFTQRDLDENALQFIIDMKNRETNDSFTFKIE
DSRGNSLKNQRIDLHWSFIELDKAGLVVCENIGTLPITLTRSGDLSGVAFVGIEAQDRTT
RVNDDYRPSSSRQVQFDPGVSTVTWNIQVFDDGIEENTENLVVYIDDPVNAILGRKRKVR
IRLINANDGECPQFIGMISKHQPSIPDSLYLPDNSIESETETVIMGNQFNRLSRQKSHHD
NTLLSDPAETSDVAVHKPKITDSDENPTETKKKDKKKRRKKRKERKDKKKKTRKGRRKNK
NREVQEEEKVTDTANGNGNFVSGQLMQNVDINAPQDCTLTTEGLLYFDPGTQQMYKCNGI
AWQAWSPASNQDQQPETRECQQGWSKYGNRCFKFINERLTWEVAETLCQMSYGSNLATVQ
SHDHQIWVSQLAGRKAYWIGLSSNEDTGRWSYSNGEALSYSNWKAGGQRVKRNLSKKNCV
IVDKKRKWRNKICSKRKARFVCEIDIGAGDLSRSPPKRDISRSRDRRRRKNKQKDRQSDD
SYTNNRERDSRRYTRTHSKEGGFFFGV
NT seq
6564 nt
NT seq
+upstream
nt +downstream
nt
atggggttgccaatgagaagagctcggatatgtgtgctatttttagcctgtatatggccg
gggcttgtaagcgcagggttggtcgtacggacgaacgctataacagtgaaagtagggcga
acagtgtatttaaatactgatgatattgtcataaagaatatgaaacgtcgagatgaagtt
tgtagaatagaagtgatacaaaaagatccaatcactcaacgtgtaggaaagcttgaacca
aagatatttgactgttcctatcaaccaaatacggtgaaatatatccacgatggttctcca
ttccttaatgaagacagaatcaagcttcgtgttcatagatttaccagcagaaaaactgtt
acagaaacattctacctcggggtgaaggtcagcaatgcttcaacggaaatagtagtaaca
cgtgggttacgtcacgtgatagtcccagaatttaacggaatctctaatacaatagacgct
tcagtgttgcgcttttaccacagtaggtcaccaaatgtgtcatgtactgtcacctttgac
aacagcacccattggcctttagtaggtcacgtgataatgggtgatcagagaacacctgtg
gaatcaattaaaacgagctgtcaagaatttctttatatggaactgcgttatgagcattta
caaaaaccaacaccggatgtggattatttccctttaagtattgaacttcatgaccctgaa
aatattgatgaattcaaaactgaacgtttctttcttccaatttacatcaaaaatgcttta
ttaaattcgcctcctcgatcttcatacaaaagtatgtacatgacggacatagaccagttt
attctttcaacaatcattcctggaattatttccgctgaagattacgagactcccgatcac
ttactgatttataacatctccaaaccatccagtccggaccaagggtatttcgttcactta
gatgaccagacaactgaagtaacttcctttctccaagatgatctagaaaaccaccgaata
gcatatcagccgcctaatattagtttctccgaaaggaaaatatatgaagttgaatttaaa
gtttacgacagccattttgccgaaagcatgccgattgtccttcacattgccattcgacct
tcatcttctaatgcaccacgtgtttcccttaacaccggactagttcttcttgaaggacaa
tcacgtgaaatcagtacaaataatttacaaatagttgataacaataatccaaatgatata
cgggtatatattatcggtggacttcagcatggtgaactcgtactcaacaatgaggtcatt
tcttactttacaatctctgatcttgtccaaggaaatgtaaaatatgttcatgatgacgga
gaatcagagcgagatttcatccagttaaggataagcgatggtaaaaaggacacagttgta
aaatttccaataacgataattccaaaagacgacaaacctccttacgttgttaacaatctt
ggaatcgagttaaatgaaggtcaaactaaacgtatagaaccttcggatctcctcgcgcat
gatccggactctattgatatgacgattacatacgtcataactcagccgacagcagcaggt
gaaatgattcgaaaaactcgtgcgtccgatactggtactcgtgtgaacagattcactcag
agggaattagttaaagggcaaattttctacagacatttcggacgtgaagatttccatgat
gaatttttattcacacttcgtgaccaacaagatccaccgaatgaatctgtgctcgaaaca
ttttacatagctattaatccggtgaatgaaaacccaccgcaattgtcaccagaagcgacc
cgcttaattcgagtgtcggagactgaaatagcaagaattaccaaatctgaacttgagtat
accgatactgagacagggtcagataggttaacgtatatcatcacgacaccgccacatttt
gtatacagtaacaggagaaataagagggaagatgccggaagagttatagcaatgcataac
tcgacaatgcaaagtaagaacaataacatatcacccgttaccaccttcaaacaggaagac
ataaaccaccttaggataggatacatgccacctatgaaagatattggtccggatccccgt
cttgtacgctttgtctacactgtacaagactctagcggtaacaaagttctcggacaacaa
ttcgatatcgatattcaaccggttaatgacaaagcaccagagttccagtcttcaaaaatg
cttgtagaagaaggcgggattctcggaatatctaccaatcatatctttgcagttgacgtt
gacacaaacgaggctgatctgacgtttatattagaaggtctaccaaaccacgggcgtctt
cagaaagggggaaataaccttctagagaaagatacatttagtatgctagatctacggaaa
aaggatttacggtacatccatgatggttccgaggttccacgtgatagctttacactgtcc
ctcacagacggtatcaatcgcgtgtctaaggtgttccaagtagagataattctagttgat
gacgaggctcccaaggtgaaggagaatttgaagcctcaccttatagtatccgagggcagc
gaggctgtaatcaactcaaatgttctatctgccaccgacgaggacacagatgaaggaacc
ctcgtgttcctcatcgtaaaacaaccaaagtacggaattctgcagctcaatggggaacct
gtcactaagtttactcaagatgatgtcagtagaggtagcgtccactatatccatagcagt
ggtgaaatcgggtcgcagatcatcaaagattctgtagcgtttattgtttcagaccaacat
tacaaagcgtctgctgatctaccaaagtaccatctgaacattacaataacaccggttgat
aatcagaaacctattataatagctggcatgcctatcgttgtagacgagggcatgaaattc
agcctgtctccggattatatcacagcaaaggatcctgacacagaacccgagtccatacaa
tttgtaataactagtcaaccacaatatggttatctggaaaacattaaacctaatcctggg
tcggagaaaagcaacgcaggacatcctgttagaacttttaaactacaagacattattgat
aaatctatcaactatgttcaagcaactcataaaggtgttgagccaacagtagatcgcttt
gagttttatgcaaccgacggtaaactgaattctttcagccacaccgctatgatagcaata
cgacctacaaatgacgaagaaccagatgtaatgctaaatgattttaccgttgccgagggt
ggtagccgcgttattgatcggtcaatggtagacgctattgatatggacaagcccaaggaa
aggataatgttatcgatttcccaaccaccagaacacggagatattgttgtgatgttgcat
acaccgaatggagacattgaagccgctgttaatgagttctcggcaagtgaacttcaccag
ggaatgaaactgaaatacatacacgacggttctgaacattacacagataaatttgcaatc
accgtgtctgatggtaagcacgagattaagaaggtgtgtaacgtaactgttgagccaata
aatgacgagagacccgaaattataaagaatgccggacttacgatggattatggggaaaaa
gcggtactgtctagtgtcgtgctacagtctgtagatctggacaacacagatgatcaaata
tattacattattgtcacggttccaaagaagggtgtcctccaattctgtaataatccaaat
gaaggtatgtattctaacaaatgtcgggacatttgggttggacataactttacccagggg
gatatcaacaacaaccgtgtccgatatcttcatacaaccggtatgagcggatcggagttt
gacaatttcatgtttatactgacagacggacagaataaacgtcatgccgagacgttccaa
attaaagttctgaattcaaagagagctaacatagctttgataaataatggaattgatgtg
gttgaaggcgagagagcagtaatatcaactgtaagtcttagtgcatctgacgaaagtact
agagccgaagagatagtatttgcagttatcagaccaccaaatttaggccaattggaatat
attgacagaaacttgatcgggatcagtagttttactcagatggatttggcatctggtaaa
ctcgtatacaatcatttgacaaaaacagactttacagaagattcgtttacattcaccgta
acaaatggaatgagtgacacaaaagattcggaatttgttatccgcattgaacctttagat
aaagaactgccgtcactagtagcgaacgaactagtagaagtgttgcaaggagcagaaatt
cctttaacggcaaacaaattaaaagctgacgatccggatactgacagtagcaacgtcact
ttccttattgcaaagcaaccaacattcggaagactttacaatcgcggtgtgtacattaca
agtctttttacccagaatgcaattgaccgtggatttatcacgtatgaaagcgatggctca
cacacgggtttagataatttccttttcacattgagtgacggaaaacacgacggtttctta
atcaatggcactcttcaacttcagcctgtgttttgtagcatttatacgaaaccacttgta
aacgacgctccaaagttaataactaaccagcatccggaagttcttgaggtattcgaagac
ggaagatatggttttcaactaaataacaacgtgcttaaggcagtggactcagatacaatg
aacacaaatttggtttacgtcatagagcaaagaccaaagcacgggcatctggaaaatact
gaggcaaagcgttacgtccgaagaaggttcacacaacgggaccttgacgaaaacgcatta
cagtttatcattgatatgaagaatagggaaacaaatgacagctttacgttcaagattgaa
gacagtcgtggaaacagcttaaagaaccagagaattgatttacactggtcattcatcgag
cttgacaaggctggacttgttgtttgtgagaatatcggtacgcttccaataacactaact
cgaagcggtgacctcagtggcgtggcgtttgttggaatcgaggcacaagacagaaccact
agagtgaatgacgattacaggccgagctcgtccagacaggttcaatttgacccaggtgta
tcgactgtcacgtggaatatacaggtttttgacgatggtattgaggagaacacagaaaac
ctcgtagtttacattgatgacccagtgaacgcaatactcggcagaaaacgtaaagtcaga
atccgtcttatcaacgccaacgacggagaatgtccacagtttattggtatgataagtaaa
caccagccatctataccagactccctctacctacctgataactcaatagaaagtgagaca
gagaccgtcattatgggtaaccaatttaaccggttatctcggcaaaagtcgcaccacgat
aacacccttctctcagatcctgcagaaactagtgatgttgctgtacataaaccaaaaatt
actgatagtgatgaaaatccaaccgaaacaaagaagaaagataagaagaaaagaaggaaa
aagagaaaggagagaaaagacaagaagaagaagacaaggaaaggaagaagaaagaataag
aacagggaagtgcaagaagaagaaaaagtaacagacacggcaaatggaaatggaaatttt
gtgtcgggacagctgatgcaaaatgtggatataaacgcaccacaagattgcactttgacc
actgagggcttactgtactttgaccccgggacacaacaaatgtataaatgtaatggcatt
gcatggcaggcatggagcccggcttcaaatcaagatcagcagccagaaaccagagaatgt
caacaaggttggtctaaatatgggaaccggtgttttaagtttattaatgagcgactcacg
tgggaggtagccgagacgctctgtcagatgtcatacggctccaacctagccacagttcag
tctcatgatcaccagatctgggtgtcacagttagccgggaggaaggcctactggataggt
ttgagcagtaacgaagacactggtaggtggagctacagtaacggggaggcactttcctat
tctaattggaaagccgggggtcaacgggtcaaacgaaatctatccaagaaaaattgtgtc
atcgttgataaaaagaggaaatggcgaaataaaatatgtagcaaacgaaaagcaagattt
gtttgtgaaattgacattggggcgggcgatttgagtagatccccacccaaaagagacata
tcacgatcacgtgatagaaggcggagaaaaaacaaacaaaaagatcgacaaagcgatgac
tcgtacaccaataatcgggaaagagattcgcgtcgatataccagaactcacagtaaagaa
ggaggattcttctttggtgtttag
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integrated database retrieval system
