Ruditapes philippinarum (Manila clam): 132745738
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Entry
132745738 CDS
T09557
Name
(RefSeq) dynein axonemal intermediate chain 4-like isoform X1
KO
K24723
dynein axonemal intermediate chain 4
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
132745738
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rphi03037
]
132745738
04812 Cytoskeleton proteins [BR:
rphi04812
]
132745738
Cilium and associated proteins [BR:
rphi03037
]
Motile cilia and associated proteins
Dynein arm
132745738
Cytoskeleton proteins [BR:
rphi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
132745738
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
DNAI3_WD
Beta-prop_NOL10_N
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_EML
Beta-prop_Aladin
WD40_RFWD3
Beta-prop_WDR3_2nd
DSE1_N
PAC11
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR55
Beta-prop_VPS8
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
PALB2_WD40
MIOS_WD40
DUF896
Motif
Other DBs
NCBI-GeneID:
132745738
NCBI-ProteinID:
XP_060590687
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
MSTSRNKKSQHMLAPGNNVGASTTSKKSHGASTMKSKYGTIRGTTYGSSRTNIPSSASKT
RSLVNAQDGGKPHKAPVQIFDETGNDVTPQPLHLADPNQVKQKQSNLLAESSGGTPTDLM
SQASIYNTGTVTASTFGGGPFTRSVFSQSYDTGSESMAEPDEPDQSQEISTAWGEIKHKR
VDVEEDLKEDDLDKIVDLTLTETETIWLLDMPGVCVSTESDEADSVRKKNEAYQDLVKNK
QGNDRYAERGMNTFNEPQKCKLVQTSKIGYTEMGINATTWDMYDTYEQIDKDTKGKSDEN
DEEGTISRPGSPKEGAEEAKPDTTDPLDTTVREKSAASVRIAKGKVAKDSRATFTSSFAG
SESVFASRETGVSSVPTEATAIDEDKILQSESFKTDLFVMERVINLNSYQGKQALYRGFN
IVNGNESEESAPISVPDIDQDLSAATQQLAVSGDVGPNFDRLWSYTCKGTQGRNVSCLSW
NKSNPDLVAVGYGQFEFSNQKEGLLMCWSLKNPEFPERVYTCKEGVTAADFSRVNPSLLA
VGLYDGGVAVYNVRHSTDEPILDNFLSPGKHTAPVWQIKWIEKERGSGEESAEVLVSIST
DGRVCQWSIRKGFECYDLMRLKKMPTRMGGKKEKKGEAFISRHAGGLSFDFNTRDANIYL
AGTEDGHIHRCSCSYNEQFLESYFGHTGPVYGIVWSPFVPDVFLSCSADWSIRLWHQDKP
RPVLNFFSSTKPVYDIAWSPNSSTVFACVNEGSVEVWDLNISTLDPIIVNNPTSGAKQTS
VTFSKNSDCLLVGDSEGQVTVLQLRSMPAPLPQDKQRDRLLEVIKHSASEDKNDLGKDID
VIDVELEGEKGEKRININLQEINDLIGE
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtctactagtcgaaataagaagtctcagcatatgcttgctccaggcaataatgttgga
gcaagcacaacatctaagaagagtcatggagcatcaacaatgaagagtaaatatggtact
ataagaggcactacatatggcagctccagaactaatattccgtcatctgccagtaagacc
cgcagtcttgtcaatgcacaagatggtggaaagccacacaaagctcctgtacagatattt
gatgaaactggcaatgatgtcacacctcagcctctacatttggctgacccaaaccaggtt
aaacagaaacagagcaatcttctagcagaaagttcaggaggcacgccaacagatttgatg
tcacaagcatctatttataacactggtactgtgacagcaagtacgtttggtggtggacct
tttacaagatcagtgtttagtcagtcttatgatacaggatcagaatctatggcagaacct
gatgaacccgaccagtcacaggagatctctacagcatggggagaaatcaagcataagaga
gttgacgttgaggaggatttaaaggaagatgatttagataagattgttgacctgactctg
acagaaacagaaacaatatggctgcttgacatgcctggtgtgtgtgtttcaacagaaagt
gatgaggctgatagtgtaaggaagaagaatgaggcctatcaagaccttgtgaagaacaaa
caaggcaatgacaggtatgctgagaggggtatgaacacttttaatgaaccacagaaatgt
aaacttgtacagacaagcaagattggatatactgagatgggaataaatgctacaacttgg
gacatgtatgatacttatgaacagattgacaaagatactaagggtaaatcagatgaaaat
gatgaagaaggtactatctctcggccaggaagtcctaaagaaggggcagaagaggccaaa
cctgatactactgatcctctagatactactgtcagagaaaaaagcgctgcctctgttaga
atagccaagggtaaggtagcgaaagatagtagagccacatttacctcctcgtttgctgga
tcagaaagtgtctttgcaagcagagagactggagtgtcatctgttcctactgaagccact
gcaatagatgaagacaaaatacttcagtcggagagttttaagacagatctgtttgttatg
gagagagttattaacctgaacagttaccagggcaaacaggctttatatagaggattcaac
attgtcaatggaaatgaatcggaggagagcgccccgatttcagtgccggatattgatcaa
gatttgagtgccgcgacacagcagttagcggtatctggtgatgtaggaccaaattttgat
cgtctttggtcgtacacctgtaaaggaacacaaggtagaaatgtcagctgcctgtcctgg
aacaagtccaatcccgatttggtagcagtaggatatggccagtttgagttctccaatcag
aaggaagggttgctgatgtgttggtctctcaaaaatccagagtttccagaacgtgtgtac
acatgtaaggaaggtgtgacggcagcagacttctccagggttaatccaagccttcttgct
gttggtctatatgatggaggtgtagccgtgtacaatgttagacattcaacagatgaacct
atcttagataactttttatcacctggtaagcatacggcaccagtatggcagatcaagtgg
atagagaaagaaagaggttcaggagaagaatcagctgaggtgttagtctccatctctact
gacggcagagtgtgtcagtggtctattaggaaaggctttgaatgttatgatttaatgaga
ctaaagaaaatgcctacaagaatgggtggtaagaaggagaagaaaggggaagcatttatt
tcacgccatgcaggaggtcttagttttgactttaatacacgcgatgctaacatttattta
gctggaactgaagatggtcacatacacagatgttcatgttcatataatgaacagtttctt
gaaagttattttggacacactggacctgtatatggtattgtatggtcaccatttgtaccc
gatgtatttttaagttgtagtgcagattggagcatcagattatggcatcaggacaaacct
agacctgtattgaacttcttctcttccacgaaaccagtctatgatattgcctggtcacca
aattcttcaacagtgtttgcctgtgttaatgaaggctctgtagaagtctgggatcttaat
attagcactttggatccaatcatagtaaataacccaacttctggtgccaaacagacctct
gtcacattctcaaagaactcggattgtttattagttggggatagtgagggtcaggttaca
gtgttacagcttagatcaatgcctgcgcctttgccacaagacaaacagcgtgacaggctt
cttgaagtgatcaaacattcagcttccgaggataagaatgatcttggtaaagacatagat
gtaatagatgtagaattagaaggtgaaaagggtgaaaaaaggataaatataaatctccaa
gaaataaatgatttgattggggagtaa
DBGET
integrated database retrieval system
