Ruditapes philippinarum (Manila clam): 132747176
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Entry
132747176 CDS
T09557
Name
(RefSeq) uncharacterized protein LOC132747176 isoform X1
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132747176
Enzymes [BR:
rphi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132747176
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132747176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-B_box
DUF3583
Prok-RING_1
PQQ_3
SGL
Flagellin_C
Motif
Other DBs
NCBI-GeneID:
132747176
NCBI-ProteinID:
XP_060592488
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MAEVDGRSTITDIDIVCTPCFEGDIREQAVKYCPECQEFLCTGCTRHHGRQRMSRSHKLL
DKNEAKQGSHVIVAAKCLYHPDREIEMYCKEHDMVYCTKCIATYHRSCRGVTCLDDLSVS
TDQKRETERLKADIMIIQERLKNTDKKTKTNLKSIEEQRNDVILQIKGLALDLVEHIQKL
EREALEGLDAEYSLVKEELETDISNISKAKQEIEQVRSQLQDVDSLDKIPQFVQTKLTQQ
TLNVAVKVFEHNEAKGSQSLYLKENTELKSLVTSSSFLGSVLRITEGKRLMTARTYKVSS
QKEKNIRMKNDKIQPYICDVCQLPDGTIILADDNNKRIKRLDVNYNNKDCFDLETHPRGI
CCTGNNEVAVKLYNSKVWFISVGSSLSKVRDITVTHGNYHGMTYFAGQLWVSDVNCVNVY
STSGSLLYSIGSDVNGQRIFTSIEQMTVSGENVFVADSSHGLVCLTRDGTVKRELSDKLL
TDTRGVCVSNDGIVFIAGCSSHNIMMFDSDGKCLGELVSKDSGLVQPLSLLFDDKRKCLV
AACFSGNMIVYYI
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagtagacggtcgttcgactataactgacattgacattgtttgtaccccttgt
tttgagggtgatattcgagaacaagctgtgaaatattgtcctgaatgtcaggaatttttg
tgcaccggatgcacgagacaccatggaagacagaggatgagccgttctcataagctatta
gacaagaacgaagcaaaacaagggtcacatgtgatcgtggcagcaaaatgtttatatcac
ccagatcgtgagatagagatgtactgtaaagagcatgatatggtttattgtacaaagtgt
attgctacataccataggtcctgtaggggagtgacatgtttagacgacttatcagtttct
actgatcagaaaagagaaacagagcgtttaaaagctgacattatgattatccaagaacgt
ttaaaaaatactgataagaaaacgaaaacaaacctgaaaagcattgaggaacaaagaaat
gacgtcattttgcaaataaaaggacttgcgctcgatttggtagaacatatccagaagttg
gaacgggaagctttggaaggtctagatgcggaatattctttggtcaaagaggaactggag
acagatatttctaacataagtaaagctaaacaagaaattgagcaggtaagaagtcagcta
caagacgtagacagtcttgataaaataccacaatttgttcagacaaaactgacacaacaa
actttaaacgttgcagtaaaagtgtttgaacacaatgaagctaaaggcagtcaatcatta
tatttgaaggaaaatacagaattaaagtcattagtcacttcatcatcgtttttagggtct
gtactaaggataacagaaggcaaacgtttgatgactgcaagaacttataaagtaagttcg
cagaaggagaaaaatatccgcatgaaaaacgacaagatccagccctacatttgcgatgta
tgtcagcttccagacggtacaatcatactggcagatgataataataagcggataaagagg
cttgatgtgaattataacaataaagattgttttgatctagaaacacatcctagaggtata
tgttgtactggcaataatgaggtcgctgtaaaactgtacaacagcaaagtttggtttata
tcagtaggcagctcattatctaaggtgagagatataactgttacacatggaaattaccat
ggaatgacatattttgctggacagttgtgggtatctgatgtaaattgtgtaaatgtatac
agtacgtctggttcattattatattctatcggtagtgatgtcaatggacaacgcatattt
acatctatagaacaaatgaccgtcagcggagaaaatgtttttgtagcagactcaagtcat
ggtcttgtctgcttgacaagagatggaacggtgaaaagagaactgagcgataaactgctt
actgacacacgcggtgtatgtgtatccaatgatgggattgtgtttattgctgggtgtagc
tcacacaacatcatgatgtttgatagcgatggaaaatgccttggagaattagtttctaaa
gattccggcctagtacaaccattatctttattgttcgatgacaagagaaaatgtttagtt
gctgcatgtttttctggcaatatgatagtatattatatctga
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