Ruditapes philippinarum (Manila clam): 132749807
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Entry
132749807 CDS
T09557
Name
(RefSeq) ATP-dependent translocase ABCB1-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132749807
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rphi02000
]
132749807
04147 Exosome [BR:
rphi04147
]
132749807
04090 CD molecules [BR:
rphi04090
]
132749807
Enzymes [BR:
rphi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
132749807
Transporters [BR:
rphi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
132749807
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132749807
CD molecules [BR:
rphi04090
]
Proteins
132749807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
ABC_ATPase
AAA_22
AAA_29
RsgA_GTPase
AAA
AAA_16
Rad17
AAA_5
DUF815
AAA_7
G-alpha
AAA_24
DUF2207_C
DUF2852
Motif
Other DBs
NCBI-GeneID:
132749807
NCBI-ProteinID:
XP_060595692
LinkDB
All DBs
Position
Unknown
AA seq
1340 aa
AA seq
DB search
MAELKGYRPTSAGGESNGRVSPSDIKAMEMKDRNGFENGTTSKINDKDSDSKNGKDKKED
APMVGIFEVFKYAEKKDVLFMILGTLSAMVHGSAFPIMIIVFGEMIDLFVKSGEFGEVAK
LLESMGILANLSSTYNVTLTYKGIIEDPTLLSNYETDIKNLSNGLVDFAAVREAVQNDLL
EVMQEFAIYFIVIGGVVFLVGYGQVMFWMIASERQTHRIRKSFYNNVMRQNIGWFDTHES
GELNSRITNDISKIHDGIGDKLGGFTQWFTGGIAGFVVGFAYGWKLTLVILAISPLLAGA
AFIMTKLIGLASSLELKAYARAGAVAEEVLGAIRTVVAFGGQEKECKRYDSNLIEARDLG
VRKGLVNGVAMGMTWLIIFGAYALGFWYGAKLAREEPDVYSIGDVMIVFFGVLIGAFSLG
NAAPNVQSFAIARGAAYIVYQLIEQEPPIDSASTKGEKPQKLEGNIIMRNLYFNYPSRPD
VKVLQGVDLEIRRGQTVALVGSSGCGKSTIVQLVQRFYDPEQGSIHIDGRDLKDMNLKWW
REQIGIVSQEPVLFGTTIKENIRYGRENVTDDEIVKATQMANAYDFIMKLPLKFETMVGE
RGAQLSGGQKQRIAIARALVRDPKILLLDEATSALDTESEGVVQEALEKASHGRTTIVIA
HRLSTIKNADMIAGFKDGRIIEKGTHDELMERNGIYYQLVTQQSMVSEDDIEAELYDKQK
AALSTQKSLIESPLKRVLSVKGETSKDEKEKKEEVNAGMGRILRLNASEWYLIALGLVGS
IINGGLMPAFAVIFAEILGVFSKPPDEQEKDINMYSLMFLGLGVLSLITYFLQGYMFGRS
GEYLTLRIRAMSFKAMLRQEIAFFDDHENNVGALTTRLSTDASQVQGAAGIRLGSTFMAI
TSIVAGLVIGFIYSWKLTLLIIAFLPFLMIGGALQMKMLNGAAGKNKEALESAGKIAIES
IENIRTVASLTREEMFNKMFSDELETPYNDALRKAHVIGLSFSFSQGIIFIAYAAAFWLG
AYLIKQAELDYVDVFKAFSAVVFGGMAIGQASSFAPDAAKAQSSAEAIFKLLDRKPEMDT
EDEGGEKPKEGQYTGQVKFTNIKFIYPTRPDTVVLNNFDLDVAPGQTVALVGSSGCGKST
TVQLTERFYDPEEGIVHMDKYNIKDLNLQWLRSQIGIVSQEPVLFDRSIGENIAYGDNTR
KVEMQEVIQAARNANIHDFISSLPEGYDTSVGEKGAQLSGGQKQRVAIARALVRNPKILL
LDEATSALDTESEKIVQEALDKAREGRTSIVIAHRLSTIQNADKICVIRHGVVTETGTHS
ELMKQQGFYYKLNMAQQRKK
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggcagaactcaaaggatatagacctacttctgctgggggtgaatcaaatggacgagtg
tctccatcggacattaaagcaatggagatgaaagataggaatggttttgagaatgggacc
acttctaaaatcaatgataaagattcagacagtaaaaatggtaaagataaaaaagaggat
gccccaatggttggcatatttgaagtgttcaagtatgctgaaaagaaagacgtgctgttc
atgatactaggaacattaagtgctatggtacatgggtcagcattcccaatcatgatcata
gtattcggtgagatgattgacctctttgtgaaatctggggaatttggcgaggtcgcgaaa
ttattggagtcaatgggtatcctggcaaatttgagctccacctacaatgtcacccttaca
tacaaaggcattatcgaagatccaacattactaagtaattatgaaactgatataaagaat
ctgtcaaatggactggtagattttgcagcggtacgagaggctgtacaaaatgaccttctg
gaggtcatgcaagagtttgccatatattttattgttattggtggtgtcgtttttctggtc
ggatatggtcaggtgatgttttggatgattgcgtcagagaggcagacgcacaggattcgt
aaaagtttctataacaacgtgatgagacaaaacattggatggtttgacacgcacgaatct
ggggaactaaattcaagaattactaatgacatatcaaaaatacatgatggtataggtgat
aaattaggcggctttacacagtggtttacaggtggaatagcgggttttgttgtaggtttt
gcatatggatggaaactgacgcttgtaatcttagcgataagtcccctactagcaggagca
gcttttataatgacaaagttgatagggctggcgtcatcattggagttgaaagcatacgct
cgtgctggggccgtagctgaggaagtgttgggagctatacgaactgtcgtagcatttggt
ggacaagaaaaggagtgtaaaaggtatgacagtaatttgatagaagcccgagatttgggt
gtgcggaaggggttggtgaatggtgtagccatgggcatgacttggttgattatatttgga
gcttacgccctcgggttctggtatggagcaaaattagctcgcgaggaaccagatgtttat
tctatcggagatgtaatgattgtattttttggtgtgctgatcggagctttctccctgggc
aatgctgcacctaacgtacagagtttcgctatcgcaagaggagctgcttatattgtatat
caactaatagagcaggagccaccaatagacagtgcatcaacaaagggagaaaagccgcag
aaacttgagggaaatataattatgagaaatctttacttcaattatccatcccgaccagat
gttaaggtattacaaggtgttgaccttgagattagaagaggtcaaactgtggccttggtg
gggtcaagtgggtgtggcaaatccaccattgttcaacttgtgcagagattctatgatcca
gaacaaggctctattcatattgatggtagagaccttaaagatatgaacctgaagtggtgg
cgagaacagatcggtatagtgagccaggaacctgtgctgttcggtacaacaattaaagaa
aacatccgttacgggcgtgagaatgtaacagatgatgagatagtaaaagcaacacagatg
gccaacgcttacgattttatcatgaaattaccattaaaatttgaaacaatggtgggagaa
agaggtgctcagcttagtgggggacagaaacagagaattgctattgcacgtgccctcgtg
cgtgatcccaaaatattgttacttgatgaagccacatctgccctggatactgaaagtgaa
ggagtagtacaggaggccctggaaaaggcaagtcatggccgaactaccattgttatagcc
catagattatccacaatcaaaaacgccgatatgatcgccggatttaaagatggccgaata
atagagaagggaacgcacgatgaacttatggaaaggaacgggatatattatcaacttgtc
acccaacagagcatggtttcagaagatgatatagaagcagagttatatgacaaacaaaaa
gctgcgctcagcacacagaagtcacttattgagtctccactgaagcgggttttgtctgta
aaaggagagacatctaaagatgaaaaggagaaaaaagaagaagtgaatgcaggaatggga
cgaattcttcgtctgaacgcatcagaatggtatcttatagctctgggtttagtaggaagt
atcattaatggaggactcatgcctgcgtttgctgttatttttgctgaaattcttggggta
ttttcaaagcccccagatgagcaagaaaaggacataaatatgtacagcctgatgtttcta
ggccttggcgtgttgagcttgatcacttatttcctacaggggtatatgtttggccgttct
ggggaatatctcacacttagaatcagagcaatgtctttcaaagccatgttgagacaggaa
atagcgttttttgacgaccatgaaaacaatgttggtgccttgacaactagactgtcaacg
gatgcttctcaagtacaaggggcggctggtatacgtcttggttcaacttttatggcgatc
acgagtattgttgcagggctggttattgggtttatctacagctggaaacttacgttacta
attatagccttcttaccatttcttatgattggtggagctctccaaatgaagatgttaaat
ggagcagccggcaaaaataaagaagctcttgaatcagcaggaaaaatagctattgagtct
atagaaaatattcggacagttgcctcccttaccagagaagaaatgtttaacaagatgttt
tctgacgaacttgagacaccgtacaatgatgccctgaggaaggcacatgtcataggcctc
tctttctcgttctcgcagggcataatctttatagcatatgctgccgctttctggttaggg
gcctacctgattaaacaggcagaactggactatgtagacgttttcaaggcattttcagct
gttgtatttggaggtatggctattggtcaagcaagctcgtttgcccccgatgctgccaaa
gctcaaagctctgctgaggctatttttaaattactggatcgaaaaccggaaatggacacc
gaagatgaaggaggagaaaaacctaaagaaggacagtacactgggcaagtgaaatttact
aatattaagtttatttaccctacaagaccggatacagtagttttaaacaacttcgactta
gatgtggcacctggtcaaactgtggcattggtgggaagttctggctgtggtaaaagtaca
actgtacagctaactgaacgattttatgatccggaagaagggattgtgcacatggataaa
tacaatatcaaagatctgaaccttcaatggctaagatcacagattggaattgtctcgcag
gaacccgttctgtttgaccgaagtattggcgaaaatattgcgtatggtgacaatacaaga
aaagtagagatgcaggaagttatacaagcggcaagaaatgcaaatattcacgattttata
tcttcgttacctgagggatatgacacaagtgttggcgagaagggagcacaactcagcgga
ggacaaaaacagagggtggccattgctcgggccttggtcagaaatccaaaaatacttctc
ttagatgaggcaacatctgctctggatactgagagtgaaaagattgtacaagaggcatta
gacaaggctagagagggtagaacaagtattgttattgcccatagactttctaccatccag
aacgcggacaaaatctgcgtcatacgtcatggcgtcgtcacagagacgggaactcatagt
gaacttatgaagcaacaaggattctactataaactgaacatggcccagcagagaaagaaa
taa
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integrated database retrieval system
