Ruditapes philippinarum (Manila clam): 132757722
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Entry
132757722 CDS
T09557
Name
(RefSeq) GATOR complex protein WDR59-like isoform X1
KO
K20409
SEA/GATOR complex protein SEA3/WDR59
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
132757722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132757722
Membrane trafficking [BR:
rphi04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
132757722
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
zf-RING_16
zinc_ribbon_16
RWD
MIOS_WD40
zf-RING_2
zinc_ribbon_2
Motif
Other DBs
NCBI-GeneID:
132757722
NCBI-ProteinID:
XP_060605073
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MTSQWGETVSFDYGDLQANTMAVDCLGKWALLAGRRVLGLVDLDDPLEKMHRLTRQSKWD
ITCIQWNPHASHAQLFAATCKQRLDLFSWADGSSKQSCSMKAHSRNISDIDWSPFDVNVI
ASCSVDAYTLLWDVRDTKRPSASFQSVCGATQVKWNKVTNNLFATAHEGDVRIWDPRKPN
TAVLYLTAHLSKIHGLDWSPSNEHIFASASQDCTVKFWDCSNTRQDKGMLKSGSPVWRAR
FTPFGDGLVTAVMSTLRRGENSLFLWNNSNLEQPAHQFIGHSDVVLEFYWRKKDESTRDY
QLVTWSKDQTLKIWKVDPQLQRMCGHETLDSSENESSTHDSSETIKENGHSHTHPEINGA
KNSNQSESFSHQQPMTLYQEFSMVNQHIPNVTIDKMDGSQRLCSVSVSSGKHIINLTIHF
PANYPHVSAPNFEIHSPTNVGLGIVKKLYKVLNETSQTNIKRNLNCLEPCIRQFATHFEN
MTLEERKTPDSDTFAPTTNKLQQSFMQQLPFAAFQDYSIPFPRTCGAQFNSAGMLVCFGR
SREASKGSEKTPKALSELAAYTSTNRVRASQSSSGFSTMFSRSPPTPKAEPVSISSYYMF
NNKRQRTKSRNYGNLQETKWKSLDKTSKREKKSVKLEPVRIYNTHCLLNIHRELAEKYSL
DVTNIESMCEHNKKEAAAVGRKDLVRLWSMIPVTCSQMLTPSTNPDDGIPWAQRPFGRQM
YESLINYYKSIHDVQTLAMICCVFWDKKIVVSVPQSSNIKKSASKASLDYVPPNYNPYHT
VSSMSGLLRSLTKALREQREESHDDTAPHMEAGSLSPPETVTSPNISNFLSRAMVKIRRS
NSLSDFSFEDYRFAEELDPKEKAEEIERKQHENNCRILDPSKYILYDHFLKVYADILYRW
GLRNQYAQIMKHVTIPPEQHAGIEFGVQCHYCKADVRGVKCGTCKMKAFQCVICHTGVKG
TSNFCLNCGHGGHAAHMKEWFRQEEVCPTGCGCFCLKWNPF
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgcagtggggcgaaactgtctcttttgactatggggatttgcaagcaaacact
atggcagttgactgcttgggcaagtgggcactgttggcaggacgaagggttctcggcctg
gttgacttggatgatccattagagaaaatgcatcgactaactagacaaagtaaatgggac
ataacatgcatacaatggaatccccatgcctcacatgcgcaactctttgcagctacttgt
aaacagaggttggaccttttttcgtgggcagatggttccagtaaacagtcatgtagtatg
aaggctcattctagaaatatcagcgatatagactggtccccattcgatgtaaacgttata
gcatcatgctcagtggatgcttacacgctgctgtgggatgtcagggacacaaagagacca
agtgcttcttttcaaagtgtttgtggagccacacaggtgaaatggaacaaagtgaccaac
aatctgtttgctactgcccatgagggtgatgtcaggatctgggatcctaggaagcctaat
acagctgtgttatacctaactgcacatttatccaaaattcatggtttagactggagccct
tctaatgagcatatatttgcttccgctagtcaagattgtactgtgaagttctgggattgt
tccaatacaagacaagataaaggcatgttgaaatccggctctccggtttggcgtgcacga
ttcacaccttttggagatggcttagtgacggcagtgatgtctacgttaagacgaggagaa
aacagtttgtttttgtggaacaactctaatctcgagcaaccggcccatcagtttataggc
catagtgatgttgtcctggaattctactggaggaagaaagacgaatcgactagagattat
caacttgtgacatggtcaaaggatcagactctgaagatatggaaggtggacccgcagcta
cagaggatgtgtggccatgagacgctagattcctcagaaaatgagtcatcaacccatgat
tcttcagaaaccatcaaagaaaatggccactcccacacgcatccagaaatcaatggtgct
aaaaatagcaaccaatcagaaagtttttctcatcagcagccaatgacattgtatcaagag
ttctcaatggtcaatcagcacattcccaatgttaccattgataagatggatggatctcaa
cggttgtgctcagtctctgttagttccggaaaacatataataaacttgacgatacatttc
ccggcaaactatcctcatgtttccgctccgaattttgaaattcattccccaaccaatgtc
ggattaggcattgtaaagaaactttataaggtattaaatgaaacatcacagacgaacata
aaaaggaatctgaattgcctggagccatgtatacgacagtttgccacacattttgaaaac
atgacgttggaggaaaggaagacaccagactcggacacatttgcaccgacaaccaataaa
ctccaacagtcatttatgcaacaactgccattcgcagcatttcaagattactccattcct
tttcctaggacatgcggcgctcagtttaattctgcagggatgttagtgtgctttggaaga
tcaagagaggcaagcaaaggttcagaaaaaactccaaaagccctgtcagagttagctgcc
tacacatccacaaaccgagttcgagcctcacagagttccagtggattttcaactatgttt
tcaagaagtccaccaacaccgaaagctgaacctgtctccatcagtagttactatatgttt
aataataagagacaaagaacaaagtcacgtaactatggaaacctacaagagacaaaatgg
aaaagtttggataagacttcaaagagggagaaaaagtcggtgaagttagaacctgtgaga
atatacaatacacattgtctgctcaatattcacagagaactggcagaaaaatacagtttg
gatgtgactaatatagaaagtatgtgtgaacataacaagaaggaagctgctgcagttggg
cggaaggatcttgttaggttatggtctatgatacctgtcacatgtagtcagatgttgacc
ccttccaccaaccctgatgacggcataccctgggcacagagaccttttggtagacagatg
tatgaatctctaattaattattacaagagtatacacgatgttcaaactcttgccatgatc
tgctgtgtgttctgggacaagaaaattgtcgtctctgtcccacaatcctccaatataaag
aaatcagcttccaaggcgtctttagactatgtccctccaaattataatccgtatcacacc
gtctcatccatgtctgggttactgagaagcttgaccaaggctttacgtgaacagagagaa
gagtcacatgatgatacagcacctcacatggaggctggaagcctgtcgcccccagaaact
gtcacatcccccaacatttcaaatttcctcagtagagcaatggtgaagataagacgctcc
aacagtttatcagatttctcatttgaggattacagatttgcagaggaattagatcccaaa
gagaaggctgaggaaattgagagaaaacagcatgaaaataactgcagaattttggaccca
agcaaatacattctgtatgaccattttcttaaagtgtatgctgatattttgtaccgatgg
ggtttgaggaaccagtatgcccagatcatgaaacatgtgacaattcctcccgaacaacat
gccggcatagagtttggggtacagtgtcactattgtaaggctgatgtcagaggggtcaag
tgtggcacatgcaaaatgaaggcattccaatgtgtcatttgtcatacaggggtcaaaggg
acctcgaatttttgtctcaactgtggacatggtggccatgctgctcatatgaaggagtgg
tttagacaggaagaggtgtgtccaacaggctgtgggtgtttctgtcttaaatggaatcca
ttttga
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