Ralstonia pickettii 12J: Rpic_3640
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Entry
Rpic_3640 CDS
T00762
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
rpi
Ralstonia pickettii 12J
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Big_9
TIG
Cadherin_5
SprB
NtrZ
Motif
Other DBs
NCBI-ProteinID:
ACD28759
UniProt:
B2U759
LinkDB
All DBs
Position
1:3805973..3810994
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AA seq
1673 aa
AA seq
DB search
MRVLTQNSPFGRRGVAGWSMFRRLEAQGREWLRQGLLAVLAIWLTVLSQGALAAACTVSF
STNMNAQKSYVFTAADTSNCDPFLSGIAYDSSGGTNSSSGPLFLTATAQGGKVAIYSGSV
PPSGDPYTNGFVYTPPSNFSGTDTATFYTSNDSVTWVPNGIVSIAVIPTAPTVTGIAPNT
GTTGGGTSVNISGTNFTVATAVKFGATNATNFTVNSATQITATSPAGSTGVVDVTVTNGG
GTSTTSAADRFTYVLPPTAGPTSITVAHGSTNNHATVDVTGATSVAVGTQPTHGTATVSG
GSITYTPNPSYSGMDSFTYTASNAGGTTAPATITVTVSNATVNYAPSSPAGGTVGAAYSQ
SLASASGGTAPYTYTIASGALPPGLTLTSNGMLSGTPTADGSFNFAVTATDSSTGTGPFS
ATSSTLSLVIGTPTITVSPVSLTNATVAAAYSQTITASGGTGPYTYAITSGALPAGLTLS
SGGVLSGTPTAGGTFNFTVTTTDSSTGTGPYTGSRTYTLVVNAPTLALTPASGSLSASTG
VAYSQTFTGSGGLAPYTYSLAVHSGTMPTGLSFNTGTGVLSGTPTTTGVVNFSVTATDHA
TGAGPYSTSGTYTLTTSAPTITVSPTTLSAATVGAAYGQTAAAGGGAAPYSYALTAGALP
TGLSLNGSTGAITGTPTAGGTFNFAVTATDANSYTGSRAYTLTVNAATVSVSPSTLPGGT
IATAYSQTMLASGGTGPYTYAVTAGSLPTGLTLSSNGTLSGTPTAGGVFNFTVTATDSST
GTGPYTGSRAYSLTIGSPTLTITPASGSLSGVAGTAYSRNFTASGGTNPYTYGFVVNSGT
VPTGLTWNGTTGRLAGTPTTAGTVSFTVTATDSSTGTGAPFAVSGVYTLTIAAPSLTVSP
ATLPNPGIATAYSQTITAANGTAPYTYAVTAGALPAGLSLNTSGFLSGTPTAGGTFNFTI
TTTDANSFTASRAYSVTIGAPTVTVNPAAATSAQVTTAYSQTFTATGGTAPYTYAVTTGT
LPAGLSLNASTGVLSGTPTTLGSSSFTVRATDSSTGTGAPYSGTRSFTITVGQVIGTAPA
ITATTMSTAPITLHATANATGGPFSSVTIVNPPASGTAVVNGLDIVYTPTQTTSGAVNFT
YALINTAGTSAPIPVTVNVNAVPIAVAQRQAITSSGQGVSVDLTEGATGGPFTAATLVSV
VPYNAGTASIVQKAIQTPAGLKPQAVAASTYVLNFTPSGTYSGQAVLTYTLSNAFATSTA
ATVQVSVAPRKDPSADPDVAGLINAQVQAARRFATTQIDNYNRRLEALHGTGRPPSSNGL
TVAMPGQRADMQARCQDVAGISAHDACMRGDGQGVRPFARGKRNADAASGSTDKSTADAG
PDLPGADAASAGPDNTDPNLAFWSAGTLDFGFASAGTQRSGFRFTTGGVTAGADYRVSDQ
LSIGGGFGYGRDSTDIGNAGTRSTGDSYSLALYGSYRPLPSLFVDGVAGFGTLSFDSRRW
VTDSNDFATGKRSGKQVFASVSAGYEHRDRAWLISPYGRLSVSQSTLDQFTESGAGINAL
TYFDQTVTTVSGTLGLRAEYTQKTKWGTFLPFARVEYQHDFNGQSNAGLAYADLASAGPA
YYVPGTPFGRDRMQIGLGTKFRTGPLTFGLDYSVMAGMGGLQQGVRLTFAAPF
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgctcacacaaaacagcccgtttggccggcgtggggttgccggatggtcgatg
ttccggcgtctggaggcgcaggggcgggaatggctgcgccagggcctgctggccgtgctg
gcgatctggctgacggtgttgtcgcaaggagcgctcgccgctgcctgcaccgtctcattc
tcgaccaacatgaatgcgcagaagtcctatgtctttacggctgcggacacgagcaactgc
gaccccttcctgtccggcattgcttacgattcttccggcggtacaaacagttcatccggc
ccgctctttcttacggcgaccgcccaaggcggcaaagtcgccatctacagcggttcggta
ccgccatcgggggatccgtataccaatggtttcgtttacacgccgccgagtaacttcagc
ggcactgataccgccacgttctacaccagcaatgacagcgtcacctgggtgcctaacggt
atcgtgagcattgctgtaatcccaactgcgccgacggtgacgggcattgcgccgaacaca
gggacgaccggcggcggcacctcggtcaacatcagcggcaccaatttcaccgtcgccacg
gccgtcaagtttggcgcgaccaacgccaccaacttcaccgtcaacagcgccacgcagatc
acggcaacatcaccggcgggcagtactggcgttgttgatgtgacggtgaccaacggcggc
ggcaccagtaccaccagcgcggctgaccggtttacctacgtgctgccgccaaccgccggt
ccgaccagcattaccgtggcgcacggcagtactaacaaccacgctacggtggacgtcacc
ggtgcaaccagcgtggctgtcggcacgcagccgacccacggcacggccacggtctcgggc
gggtcgatcacctacacgcccaacccgtcgtactcaggcatggactcgttcacctacacg
gctagcaatgcgggcggcacgacggcgccggccacaatcaccgtcaccgtgtcgaatgcg
acggtcaactacgcgccgtcctcacccgctggcggcactgtcggtgcggcctacagccag
tcactggcgtcggccagtggcggcacggcgccgtacacctatacgatcgcgtccggcgcg
ttgccgccagggctgacgctgacaagcaacggcatgctatcgggtacaccaaccgccgat
ggcagcttcaactttgcggtaaccgccaccgacagcagtacgggcacgggcccgttctct
gccaccagcagcacgctgtcgctggtgatcggcacgccaactattaccgtatcgccggtt
tcgttgacgaacgcgacggtggctgcggcttacagccagacgataacggccagcggtggc
acagggccatacacctatgccatcacctccggtgcgctgcccgccgggctcacgctcagt
tcgggcggcgtgctgtcggggacgcccacggcgggcggcacgttcaacttcaccgtgacc
accaccgacagcagcaccggtactggcccatatacgggcagccgtacctatacgctggtc
gtcaatgcacccacgttggcgctcaccccggcatcgggcagtctcagtgcttcaaccggc
gtggcgtacagccagaccttcacaggcagcggcggtctggcgccatacacctatagcctt
gcggtccatagcgggacgatgccgaccggtctctcgttcaacaccggaaccggcgtgttg
tccggtacgccgaccaccacgggcgtggtcaacttctcggtgactgccaccgaccacgca
acgggcgcggggccgtacagcacgtctggcacctacacgctgaccacctcggcgcccacc
attaccgtgtcgcccaccaccctgagtgcggcgactgtcggcgccgcctacggccagact
gccgcggccggcgggggtgccgcgccttacagctacgcgctgactgccggtgcgctgccg
acgggcctgagcttgaacggcagcactggcgcgatcactggtacgcccacggcgggcggc
accttcaacttcgcggtcacggctactgatgccaacagctataccggctcgcgcgcgtac
accctgacggtcaacgcagctaccgtctcggtcagcccgagcacgttgccgggcggcacc
atcgctacggcatacagccagaccatgttggccagcggcggcacaggtccctacacgtat
gccgtcacggcaggttcgctgccgacggggctgacgctgtccagcaacggcacgctgtcg
ggtacgcccacggcgggtggggtgttcaacttcaccgtcaccgcgactgacagcagtacc
ggaaccggcccttacacgggtagccgtgcctactcgctgacgattgggtcgcccaccttg
accatcacgccggcctcgggctctctcagcggtgtcgcaggcaccgcttacagccgcaac
ttcacggcaagtggtggtacgaacccatacacctatggcttcgtggtgaatagcggcact
gtccccacgggccttacgtggaacggcaccaccggcaggctggcagggaccccaaccacg
gccggcacggtcagctttaccgtcaccgctaccgacagttcgacggggacgggtgctccg
tttgcggtaagcggtgtctacacgcttaccattgccgcgcctagcctgacggtatcgccg
gccacgctccccaacccggggattgcaacggcgtacagccaaaccataacggcggccaac
ggcaccgcgccgtacacctatgctgttacggcgggcgcattgccggctggcctgagcctg
aacacctccgggttcctgtcgggtacacccaccgcaggcggaacgttcaacttcaccatc
acgacaacggatgccaacagcttcacggccagccgtgcttacagcgtcaccatcggtgcg
cccacggtcacggtgaatccggcggccgcaacgtcggcccaagtcaccacggcctacagc
cagaccttcacagctaccggcggtaccgcgccctacacgtacgccgtcaccaccggcacg
ttgcctgcgggcctgagcttgaacgccagcactggcgttctgtcgggcacgcccactacg
ctgggcagcagctcattcacagtgagggccaccgacagcagcacgggcactggcgccccg
tacagcggtacgcgcagcttcacgatcacggtgggccaggtgatcggcaccgcgccggca
atcacggccaccaccatgtcgacggcaccgatcacgctgcatgcaacggccaatgcaacc
ggcggtccgttctcgtccgtcacgattgtcaatccgcctgccagcggcactgccgtcgtc
aacggtctggacatcgtctacacgccgacccagaccacctccggcgcagtcaatttcact
tatgcgctgatcaacacggccggcacgtccgcgccgattccggtaacggtcaacgtgaac
gccgtgccgattgcggtggcgcagaggcaggccatcacgtcgtcgggccagggggtgagc
gtggacttgaccgaaggcgccacgggtggccccttcacggcggcgacgctggtgtcggtg
gtgccctacaacgcgggtacggccagcatcgtgcagaaggcgatccagacaccggccggc
ctgaagccgcaggcagtggcggcatcgacgtacgtgctgaacttcaccccgtcaggcacc
tacagcggccaggccgtgctgacgtacacgctgtccaacgcgttcgccacctcgacggct
gcaacggtgcaggtgagcgtggcgccgcgcaaggacccctcggccgatcctgatgtggca
ggtctgatcaacgcgcaagtgcaggccgcgcgccgcttcgccaccacgcagattgacaac
tacaaccgccgcctggaagcgctgcacggcactggccggccaccctcgagcaacggtttg
acggtcgccatgccgggccagcgcgcagacatgcaagcgcgttgccaggatgtggccggc
atttccgcgcacgatgcctgcatgcgcggtgacggtcagggcgtgcggccattcgcacgc
ggcaagcgcaacgccgatgcggccagcggcagcaccgacaagtcgaccgccgatgccggc
cccgatctgcccggcgctgatgccgccagcgcgggcccggacaacaccgacccgaatctc
gcgttctggagcgccggtacgctggactttggttttgccagcgctggcacgcaacgctcc
ggtttccgcttcaccacaggcggtgtgacggccggcgcggactaccgcgtgtccgatcag
ctctcgatcgggggtgggtttggttacgggcgtgactccaccgacatcggcaacgcgggc
accaggagcacgggcgacagctatagcctcgcgctgtacggcagctatcgcccgctgcct
tcgttgttcgtcgatggtgtggccggcttcggcacgctcagtttcgactcgcgccgctgg
gtgacggactccaacgacttcgccaccggcaagcgcagcggcaagcaggttttcgcctcc
gtgtcggccggctatgagcatcgcgatcgtgcgtggctgatctcgccttacgggcgcctg
tcggtctcgcaatcgacgctggatcagttcaccgaatcgggcgccggcatcaacgcgctg
acgtatttcgaccagacggtgacgacggtatccggcacgctcggcctgcgtgcggaatac
acgcagaagaccaagtggggcacgttcctgccgttcgcacgggtggagtaccagcacgac
ttcaatgggcagagcaatgcaggtttggcgtatgccgatctggcatcggcaggccctgct
tattacgtgccgggtacaccgtttgggcgcgatcgaatgcagatcgggttggggacaaag
ttccggactggcccgctcacgtttgggttggactacagcgtgatggcgggcatggggggc
ttgcagcagggggttcggttgacgtttgctgcaccgttctga
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