Ralstonia pickettii DTP0602: N234_05525
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Entry
N234_05525 CDS
T03172
Name
(GenBank) single-stranded DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rpj
Ralstonia pickettii DTP0602
Pathway
rpj03410
Base excision repair
rpj03430
Mismatch repair
rpj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N234_05525
03430 Mismatch repair
N234_05525
03440 Homologous recombination
N234_05525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpj03400
]
N234_05525
DNA repair and recombination proteins [BR:
rpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
N234_05525
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
N234_05525
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
N234_05525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-GeneID:
17101010
NCBI-ProteinID:
AGW89481
LinkDB
All DBs
Position
1:complement(1156963..1158660)
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AA seq
565 aa
AA seq
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MTRIAIRQYSPEHASSLAAAGLHPTLARILAARGVARTAELATDLPELVPPAAMKGIGHA
AAYLTDAIAAGKRLLIVADYDCDGATACAVGVRGLRMLGARVEYIVPNRFEYGYGLTPEI
VALAAKQQPDVIVTVDNGIASVDGVAAANALGIDVVVTDHHLPGAELPEAAVIVNPNQPG
CEFPSKNLAGVGVMFYVLLALRAELRNRGVYTQATQPPLQTLLDLVALGTVADVVKLDTN
NRILVAQGLRRMRAGRMQPGVAALFRAAGREASRANTFDLGFGLGPRLNAAGRLADMSLG
IECLLTDDANRAWEIAQELDSMNRERRDIEAGMQQEALQILEQPLAGPDPSARFTVSVFN
DTWHQGVIGIVASRLKDKFHRPTITFAPGDEATIKGSGRSIPGFHLRDALDLVSKRHPGM
LVKFGGHAMAAGLTVRAERFAEFQEAFESIGKEWLTDDQLARVIETDGDIEDQCFSPEFV
TLLEQQVWGQGFPAPTFCGEFDVLRQSVLKGKHLKLQLGRGSQRFDAIWFNHADSLGASA
QVAYRLDNNTFNGVTRVQLVIEHAQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacccggatcgccatccgccaatattcccccgaacacgccagctcgctggccgccgcc
ggcctgcatcccacgctggcccgcatcctggccgcgcgcggcgtggcccgcaccgccgaa
ctggcgaccgatctgcctgaactggtgcctcctgccgcgatgaagggcatcggccacgcc
gccgcctacctgaccgacgccatcgccgccggcaagcgcctgctgatcgtcgccgactat
gactgcgacggcgccaccgcctgcgcggtgggcgtacgcgggctgcgcatgctgggcgcg
cgggtcgagtacatcgtgccgaaccgcttcgagtacggctacggcctgacgccggaaatc
gtggcgctggcggcgaagcagcagccggacgtgatcgtcacggtggataacggcatcgcc
agcgtcgacggcgtggccgcggccaatgcgctgggcatcgacgtggtggtgaccgaccac
cacttgccgggcgcggagctgccggaagccgcagtgatcgtcaaccccaaccagcccggc
tgcgaattccccagcaagaacctggcgggcgtgggcgtgatgttctatgtgctgctggcg
ctacgcgccgagctgcgcaaccgcggggtctacacgcaggcgacccagccgccgctgcag
acgctgctggacctggtggcgctgggcaccgtggcggacgtggtcaagctcgacaccaac
aaccgcatcctggtcgcgcagggcctgcgtcgcatgcgcgccgggcgcatgcagcctggc
gtggcggcgctgttccgcgcggcgggccgcgaggcctcgcgcgccaataccttcgacctg
ggcttcggactcggtccgcgcctgaacgcggccgggcggctggcggacatgtcgctcggc
atcgaatgcctgctgaccgacgatgccaaccgcgcctgggagatcgcccaggagctcgac
agcatgaaccgcgagcggcgcgatatcgaggccggcatgcagcaggaggcgctgcagatc
ctggagcagccgctggccggcccggacccgtcggcgcgatttaccgtcagcgtgttcaac
gacacctggcaccagggcgtgatcggcatcgtggcttcgcggctgaaggacaagttccac
cgccccaccatcaccttcgcgccgggcgacgaagccaccatcaagggctcaggccgttcg
atccccggtttccacctgcgcgatgccctcgacctggtgtccaagcgccatcccggcatg
ctggtcaagttcggcggccacgcgatggcggcaggcctgaccgtgcgagccgagcgcttt
gccgagttccaggaagcgttcgaatcgatcggcaaggaatggctgaccgacgaccagctc
gcgcgcgtgatagagaccgacggcgatatcgaggaccagtgcttcagcccggaattcgtc
acgctgctggagcagcaggtgtggggccagggcttcccggcaccgaccttctgcggcgag
ttcgacgtgctgcgccagagcgtgctcaagggcaagcacctgaagctgcagctcgggcgc
ggcagccagcgcttcgacgcgatctggttcaaccacgccgactcgctcggcgccagtgcg
caggtggcctaccggctcgacaacaacacctttaacggcgtcacgcgggtgcaactggtg
atcgagcacgcgcaatag
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