Raoultella planticola: B1209_24765
Help
Entry
B1209_24765 CDS
T05298
Name
(GenBank) miniconductance mechanosensitive channel MscM
KO
K22051
miniconductance mechanosensitive channel
Organism
rpln
Raoultella planticola
Brite
KEGG Orthology (KO) [BR:
rpln00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpln02000
]
B1209_24765
Transporters [BR:
rpln02000
]
Other transporters
Pores ion channels [TC:
1
]
B1209_24765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AUV55472
UniProt:
A0A8G2E971
LinkDB
All DBs
Position
5131938..5135264
Genome browser
AA seq
1108 aa
AA seq
DB search
MRLIYIFLLAWSLSLGAYAATAPDAKQIAQELEQAKAAKPAQPGTVEALQSALNALEERS
ASLERARQYQQVIDNFPKLFQTLRSQIGNLPDEPRQVSTNLSTDALNQEILQVSSQLLEA
SRQAQQEQERARDIADSLNQLPQQQSDARRQLNEVERRVGTQTSNTPLAQAQNLGLQAES
ARLKALVNELDLAQLSANNRQELSRMRGDLAQKQGKLLDGYLQALRNQLNSQRQREAEKA
LESTELLAENSENLPPELVAQFKVNRELSQALNQQAQRMDLVASQQRQAANQTLQVRQAL
NTLREQSQWLGSSNLLGEALRAQVARLPETPKPQQLDTEMAQLRVQRLHYEDLLGSQPQL
RLIRQADGEPLTSEQSRILEAQLRTQTELLNSLLQGGDTLILELTKLKVSNGQLEDALKE
INEATHRYLFWTSDVSPIGFSWPLEIVHDLRRLVSLDTVSQLGKASAMMLTSKETLLPLF
GALILVGFSISSRRHFTRFLERSSARVGKVTQDHFWLTLRTVFWSILVASPLPVLWMTLG
YGLQSAWPYPLAVAIGESVTATVPLLWVVMICATFARPNGLFIAHFGWPRSRVSKAMRYY
LMSIGLIVPLIIALIMFDNLNDREFSASLGRLCFLLICGALALVTLSLKHAGIPLYLDKA
GNGDNMVNRMLWNLLLGAPLIAMLAAAIGYLATAQALLARLETSVAIWFLLLVVYHIIRR
WMLIQRRRLAFDRAKHRRAEILAQRARGEDDVAHSSSPEGSAENEVSEIDLDAISTQSLR
LVRSLLMLIALVSVIVLWSEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILV
LIITTQLVRNLPALLELAILQHLDLTPGTGYAITTITKYLLMLIGGLMGFSMIGIEWAKL
QWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTRINTRATTIS
DWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTIPAPADANTEEVTQILIAAAHRCSLV
IDTPAPEAFLVDLQQGIQIFELRIYAAEMGHRMPLRHELHQLILAGYREHGIDMPFPPFQ
MRLESIDGRKSSRALTSAGKSSRTAGSL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgatatatattttcctgctggcctggagcctcagtctgggggcgtacgcagcg
acagcccccgatgcgaaacagatcgctcaggaactggaacaggcgaaggcggcaaaaccc
gctcagcctggtaccgttgaagccttacaatctgcactgaacgcgctcgaggaacgcagc
gcctcccttgagcgcgcgcgccagtaccagcaggttatcgataatttccccaaacttttc
cagacgctgcgttcgcagatcggcaatctgcccgatgagccgcgccaggtctcaaccaat
ctctccacggatgcgctgaaccaggaaatcctgcaggtcagcagtcagctgctcgaagcc
agccgccaggcccagcaggagcaggaacgcgcccgcgatatcgccgattcgcttaaccag
cttccgcagcagcagagcgacgcgcgtcgccagctcaatgaagttgagcgccgcgtcggc
acgcaaaccagcaatacgccgctggcacaggcgcagaatcttggtctgcaggcggaatct
gcgcgcctgaaagcgctggtgaacgaactggatctggcacagctctcggcgaacaatcgt
caggagctgtcgcggatgcgcggcgatctggcgcagaagcagggcaagctgctcgacggc
tatctgcaggcgctgcgcaatcagctcaatagccagcgtcaacgtgaagcggaaaaagcg
ctggaaagcaccgagctgctggcagagaacagtgaaaacctgccgccggagctcgtggcc
cagtttaaagtcaaccgtgagctgtcacaggcgctgaaccagcaggcccagcgtatggat
ctggtggcctcgcagcagcgtcaggcggccaaccagacgctgcaggtgcgccaggcgctg
aataccctgcgcgaacagtcgcagtggctgggctcctccaacctgctgggcgaagccctg
cgcgcccaggtagctcgtctgccggaaacgccgaagccgcagcagctggataccgagatg
gcgcagctccgggtgcagcgtctgcattatgaggatctgctcggcagccagccgcagctg
cgtctgattcgccaggcggacggcgagccgctcaccagtgaacaaagccgcattctggaa
gcgcagctgcgcacgcaaaccgagttgctcaattcgctgctccagggcggcgatacgctg
atactggagctgaccaagctgaaggtctccaacggtcagctggaagatgcgctgaaagag
atcaacgaagcaacgcaccgctatctgttctggacgtcggacgtcagcccaatcggtttt
tcgtggccgctggaaatcgtccacgacctgcgccgcctggtctctctcgataccgtcagc
cagcttggcaaagccagcgccatgatgttaaccagcaaggagacgctgctgccgctgttt
ggcgcgctgatcctggtcggcttcagcatcagttcgcgccgccactttacccgcttcctc
gaacgctccagcgcccgcgtcggcaaagtcacgcaggatcatttctggctcacgctgcgt
acggtgttctggtcgattctggtggcctctcccctccccgtgctgtggatgacgctgggc
tacggcctgcaatcggcatggccctatccgctggcggtggcgatcggcgaaagcgtcacc
gccacggtgccgctgctgtgggtggtgatgatttgcgccacctttgcgcgtccgaacggc
ctgtttatcgcgcacttcggctggccgcgcagtcgcgtcagcaaagccatgcgctactac
ctgatgagcatcggcctgatcgtgccgctgattatcgcgctgatcatgtttgataatctt
aacgaccgggagttttccgcttcgctcggtcgcctctgcttcctgctgatttgcggggcg
ctggcgctggtcaccctgagcctgaagcatgccgggatcccgctttatctcgataaagcc
gggaacggcgataacatggttaaccgcatgctgtggaacctgctgctcggcgcgccgtta
atcgccatgctggcggcggcgatcggttatctggccaccgcccaggcgctgctggcaagg
ctggaaacctccgttgctatctggttcctgctgctggtggtctaccacatcattcgccgc
tggatgctgattcagcgccgccggctggccttcgatcgcgcgaaacatcgacgggcggaa
attctcgctcagcgtgctcgcggggaagatgacgtcgcccattccagcagtcctgagggt
tccgcggagaacgaagtgagtgaaatcgatctcgatgcgatcagtacgcagtccctgcgt
ctggtccgttcgctgctgatgttgatcgcgctggtctcggtgatcgttctgtggtcagaa
attcactccgccttcggcttcctcgaaaatatctcgttgtgggatgtcacctcgacggtg
cagggcgttgaaagtctggagccgattaccctcggcgccgtgctgattgccattctggtg
ctgattatcaccacccagctggtgcgaaacttaccggcgctgctggagctggcgattctg
caacacctcgatctcaccccggggaccgggtatgccatcaccaccatcaccaaatatctg
ctgatgctgattggcggcctgatgggcttctcgatgattgggattgaatgggccaagctg
cagtggctggtcgccgccctcggcgtagggctgggctttggtctccaggagatcttcgcc
aactttatctccggcctgatcatcctgtttgaaaaaccgatacgtattggcgatacggtc
acgatccgcgatctgaccggcagcgtcacccgcatcaatacccgcgccaccaccatcagc
gactgggaccgtaaagagattatcgtgcctaacaaggccttcatcaccgagcagtttatc
aactggtcgctctctgactcggtcacccgcgtggtgttaaccatcccggcgccagcggat
gccaacaccgaagaggtcacgcagatcttgatcgccgccgcccaccgctgttcgctggtg
atcgatacgccggcgccggaagcgttcctcgtcgacctgcagcaggggattcagattttc
gagctgcgtatctacgccgccgagatgggacatcgtatgccgctgcgtcacgagctccac
cagctgattctggccggctatcgtgaacacggtatcgatatgccgttcccgccgttccag
atgcgtctggaaagtattgatggcagaaaaagcagccgggcgctgacgtcagccgggaaa
tccagccgcacggcggggagcctgtaa
DBGET
integrated database retrieval system
