Rickettsia prowazekii Madrid E: RP249
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Entry
RP249 CDS
T00018
Symbol
RP249
Name
(GenBank) D-ALANINE--D-ALANINE LIGASE (ddlB)
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rpr
Rickettsia prowazekii Madrid E
Pathway
rpr00470
D-Amino acid metabolism
rpr00550
Peptidoglycan biosynthesis
rpr01100
Metabolic pathways
rpr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rpr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RP249 (RP249)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RP249 (RP249)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RP249 (RP249)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpr01011
]
RP249 (RP249)
Enzymes [BR:
rpr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RP249 (RP249)
Peptidoglycan biosynthesis and degradation proteins [BR:
rpr01011
]
Precursor biosynthesis
Amino acid ligase
RP249 (RP249)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
CPSase_L_D2
GARS_A
Motif
Other DBs
NCBI-ProteinID:
CAA14711
UniProt:
Q9ZDS6
LinkDB
All DBs
Position
306123..307088
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AA seq
321 aa
AA seq
DB search
MHKYQTHFVEHSVVKILSSTGKKHIALVAGGMSAEREVSLVSSAGVSKALIELGYKVTFV
DMGADIAVKLQEINPDIVFNCLHGTYGEDGCLPGLLNIMRIPYTHSGLLSSALAFDKIHF
RSCVLKNNINIADSIVVSKSDHINTDPMKRPYVIKPLKQGSSIGVEVIFEEDDFNFTDYD
FPYGEDIIIEQYIQGQELQVALLNGKALGVLEIKLLKNRFYDYETKYNEGFAEHVCPAPL
PANLYKKLLIESEKIYKTINCKGPVRAEFILEEQTNKLYVLEINTHPGMTPLSIVPEIAA
YAGINFTNLIEEIIKMASFES
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaatatcaaacacattttgtagaacactctgtagtcaaaatattaagtagtaca
ggtaaaaagcatatagcattagtagcgggtggtatgtctgctgagcgtgaagtctcttta
gtatccagtgcaggagttagtaaagctttaattgaattaggatataaagttacatttgtt
gatatgggtgcagatattgcagtaaaattacaagaaataaaccctgatattgtttttaac
tgtttacatggtacatatggtgaagatggttgtttaccaggattacttaatataatgcgt
attccttatactcatagtggtctattatcttcggctttagcattcgataaaatacacttt
agaagctgtgtcttaaaaaataatattaacattgcagacagtattgtcgttagtaaaagt
gatcatataaacactgatcctatgaagcgaccgtatgtaataaaacctcttaaacaagga
tcaagtattggtgttgaagtaatatttgaagaggatgattttaactttaccgattatgat
tttccttatggtgaagatataataatagagcagtatatacaagggcaagaattgcaagta
gcattactaaatggcaaagctttaggtgttttagaaattaaattactaaaaaatcgtttt
tatgattatgaaactaaatataatgaaggatttgctgaacatgtgtgtcctgctccgcta
cctgctaatttatataaaaaattactgatagaatcagaaaaaatttataaaacaataaat
tgtaaaggtcctgttagagcagagttcattttagaagaacagacaaacaaattatatgtt
ttggagatcaatactcaccctgggatgacgcctttatcaatagtgccagaaattgcagcc
tatgcagggataaattttactaatttaattgaagaaattataaagatggcaagctttgaa
tcatga
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