Rhodopseudomonas palustris TIE-1: Rpal_1155
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Entry
Rpal_1155 CDS
T00722
Name
(GenBank) nickel-dependent hydrogenase large subunit
KO
K06281
hydrogenase large subunit [EC:
1.12.99.6
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt00633
Nitrotoluene degradation
rpt01120
Microbial metabolism in diverse environments
rpt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
Rpal_1155
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rpal_1155
Enzymes [BR:
rpt01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
Rpal_1155
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Gene cluster
GFIT
Motif
Pfam:
NiFeSe_Hases
Motif
Other DBs
NCBI-ProteinID:
ACE99694
UniProt:
B3QGU7
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All DBs
Position
1225769..1227562
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AA seq
597 aa
AA seq
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MTNVTTPNGFKLDNAGRRVVVDPVTRIEGHLRVEVNVDSNNVIRNAVSTGTMWRGIEVIL
KGRDPRDAWAFTQRICGVCTGTHALTSVRAVENALKINVPENANTIRNIMQLALYVHDHL
VHFYHLHALDWVDVVSALKADPKATSALAQSISPWPMSSPGYFKDLQIRLTKFVESGQLG
PFKNGYWGHPAYKLPPEANLMAVAHYLEALDFQKEIVKIHTVYGGKNPHPNWLVGGVPCS
INVDGTGAVGAINIERLNLVSSIIDQTVAFVEQVYVPDLVAIAGFYKDWLYGGGLSSKSV
MSYGDLPEYANDYSDKSLMLPRGVIINGNLNEVLPVDLSAPDQIQEFVTHSWYKCADEGK
GLHPYDGVTEPNFVLGPNAKGTRTNIEALDESAKYSFLKAPRWKGHAVEVGPLARYIIGY
AQGKPEFKEPTEKLLKTLDVPVTALFSTLGRTAARGLECQWAARKLRAAQDKLMASIKAG
DLSTANTDKWHPSSWPKDVKGVGFTEAPRGALAHWVKIKDTRIDNYQCVVPTTWNGSPRD
PQGNIGAFEAALLDTPMADPNQPLEIIRTLHSFDPCLACSTHVMSEDGQEMAQVKVS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgtcacgactcccaacggcttcaagctcgacaatgccggccgccgcgtcgtc
gtcgatccggtgacccggatcgagggacacctgcgcgtcgaggtcaatgtcgacagcaac
aacgtcatccgcaatgcggtgtcgaccggcacgatgtggcgcggcatcgaggtgatcctc
aagggccgcgatccgcgcgacgcctgggcgttcacccagcggatctgcggcgtctgcacc
ggcactcacgcactcacgtcggtgcgcgcggtcgagaacgcgctgaagatcaacgtgccg
gagaacgccaacaccatccgcaacatcatgcagctcgcgctgtatgtgcatgaccatttg
gtccacttctatcatctgcacgcgctcgactgggtcgacgtggtgtcggccctgaaggcc
gacccaaaagccacctcagcgctggcgcagtcgatctcgccgtggccgatgtcgtcgccg
ggctacttcaaggatctgcagatccgcctgaccaagttcgtcgagagcggccagctcggc
ccgttcaagaacggctattggggccatcccgcctacaagctgccgcccgaagccaatctg
atggcggtggcgcactatctcgaggcgctcgatttccagaaggaaatcgtcaagatccac
accgtctacggcggcaagaacccgcatccgaactggctggtcggtggcgtgccgtgctcg
atcaatgtcgatggtaccggcgcggtcggcgcgatcaacatcgagcggctcaatctggtg
tcgtcgatcatcgaccagaccgtcgccttcgtcgagcaggtctatgtgcccgatctggtg
gcgatcgccggattctataaggactggctgtatggcggcgggttgtcgtcgaagtcggtg
atgtcctacggcgacctgccggaatacgccaacgactattccgacaagagcctgatgctg
ccgcgcggcgtgatcatcaacggcaatctcaacgaggtgctgccggtcgatctgagcgcg
ccggaccagatccaggaattcgtcactcactcctggtacaaatgcgccgatgagggcaag
ggcctgcatccgtatgacggcgtcaccgagccgaacttcgtgctcggccccaacgccaag
ggcacccgcaccaacatcgaggcgctggacgaatctgccaaatactcgttcctcaaggcg
ccgcgctggaaggggcacgcggtcgaggtcgggccgctggcgcgctacatcatcggctac
gcccagggcaagccggagttcaaggagccgaccgaaaagctgctgaagacgctcgacgtg
ccggtcaccgcgctgttctcgacgctcggccgcactgcagcgcgcgggctcgaatgccag
tgggcggcgcgcaagctgcgcgcggcgcaggacaagctgatggccagcatcaaggccggc
gatctatccactgccaataccgacaaatggcacccgtcgagctggccgaaagacgtcaag
ggcgtcggcttcaccgaggcgccgcggggcgcactggcgcactgggtcaagatcaaggac
acccggatcgacaattatcagtgcgtggtgccgaccacctggaacggcagcccgcgcgat
ccgcaaggcaacatcggtgcattcgaagcggcgctgctcgacacgccgatggccgacccc
aaccagccgctggagatcatccgcacgctgcattcgttcgatccgtgcctcgcctgctcg
acccacgtgatgagcgaggacggtcaggaaatggcacaggtcaaggtcagctga
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