Rhodopseudomonas palustris TIE-1: Rpal_2950
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Entry
Rpal_2950 CDS
T00722
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpt03009
]
Rpal_2950
Enzymes [BR:
rpt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Rpal_2950
Ribosome biogenesis [BR:
rpt03009
]
Prokaryotic type
ribosomal protein modification factors
Rpal_2950
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ACF01458
UniProt:
B3QIV5
LinkDB
All DBs
Position
complement(3222952..3224277)
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AA seq
441 aa
AA seq
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MQQATAPKISFVSLGCPKALVDSERIITRLRAEGYELARKHDGADLVIVNTCGFLDSAKQ
ESLAAIGEAMATNGKVIVTGCMGAEPEQIEAAYPGVLSITGPQQYESVLDAVHRARPALH
NPHLDLVPPQGVRLTPRHYAYLKISEGCNNRCSFCIIPKLRGDLVSRPAGDVLREAEKLV
AAGVKELLVISQDTSAYGVDVKYAESPWKDRAVRAKFLDLASELGELGAWVRLHYVYPYP
HVDEVIGLMADGKVLPYLDIPFQHASPDVLKLMKRPAAQDKTLDRIKRWREQCPDLALRS
TFIVGFPGETERDFEFLLEWLDEAEIDRLGAFKYEPVAGAPSNALPDQIADEVKQERWNR
LMARQQAISARRLKRKVGTRQQVIIDEIGPTVTKGRSKADAPEIDGAVYLSSRRPLRVGE
IVTAKIDRADAYDLHGTVAGF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggccaccgcgcccaagatcagttttgtttcgctgggatgccccaaggccctg
gtcgattccgagcgcatcatcacccggttgcgcgccgagggctacgagctggcgcgcaag
cacgacggcgcggacctcgtcatcgtcaacacctgcggcttcctggacagtgccaagcag
gaatcgctggcggcgatcggcgaagcgatggcgaccaacggcaaggtgatcgtcaccggc
tgcatgggcgccgagccggagcagatcgaagccgcctatcccggcgtgctgtcgatcacc
ggcccgcagcaatatgagagcgtgctcgacgcggtgcatcgcgcccggccggcgctgcac
aacccgcatctcgatctggtccccccgcagggcgtgcggctaacgccgcggcactatgcg
tatttgaagatctcagagggctgcaacaatcgctgcagcttctgcatcatcccgaagctg
cgcggcgatctggtatcacgcccggccggcgacgtgctgcgcgaggccgagaagctggtc
gccgccggcgtcaaggagctgctggtgatctcgcaggacacctcggcctacggcgtcgat
gtgaagtacgcagagagcccgtggaaggaccgtgccgtccgcgccaaattcctcgatctg
gccagcgaactcggggagctcggcgcctgggtgcggctgcattacgtctatccgtatccg
catgtcgacgaggtgatcggcttgatggcggacggcaaggtgctgccttatctcgacatc
ccattccagcacgccagccccgacgtgctgaagctgatgaagcgcccggccgctcaggat
aagacgctcgaccggatcaagcgctggcgcgagcagtgcccggatctggcgctgcgctcg
accttcattgtgggcttccccggcgagaccgagcgcgatttcgaattcctgctcgaatgg
ctcgacgaagcagaaatcgatcgtctcggcgcgttcaaatacgagccggtcgccggcgca
ccgtccaacgccctgcccgatcagatcgcggacgaggtcaagcaggagcgctggaacagg
ctgatggcgcggcagcaggcgatctccgcccgccggctgaagcgcaaggtcggcacccgc
cagcaggtgatcatcgacgagatcggcccgaccgttaccaaaggccgctccaaggccgac
gcgccggagatcgacggcgccgtctatctgtcgagccgccgcccgctgcgcgtcggcgaa
atcgtcaccgccaagatcgaccgcgccgacgcgtacgacctgcacgggaccgtggcgggg
ttctaa
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