Ralstonia pseudosolanacearum RS 476: CDC45_00050
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Entry
CDC45_00050 CDS
T05645
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
rpu
Ralstonia pseudosolanacearum RS 476
Pathway
rpu01501
beta-Lactam resistance
rpu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rpu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CDC45_00050
01503 Cationic antimicrobial peptide (CAMP) resistance
CDC45_00050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpu02000
]
CDC45_00050
01504 Antimicrobial resistance genes [BR:
rpu01504
]
CDC45_00050
Transporters [BR:
rpu02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CDC45_00050
Antimicrobial resistance genes [BR:
rpu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CDC45_00050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
AST25724
LinkDB
All DBs
Position
complement(8446..11595)
Genome browser
AA seq
1049 aa
AA seq
DB search
MAKFFIDRPVFAWVLALFIIVAGAISITQLPIAQYPTIAPPSIIITATYPGASAKTLDDA
VTSIIEQEMNGADGLLYIESVSQAGNGQATITVTFKPGTDPALAQVDVQNRLKRVEARLP
SSVTQQGVQVDKTRSNFLLFATLISKDGKMDPVALGDYISRNVLNEVKRVPGVGQAVLFG
TERAMRIWIDPAKLVGYKLTPTDVYNAIRNQNALVSAGTLGDLPSTSDQPIAATVVVEGQ
MTTTEQFGNIVLVSKPDGSQVRIKDVARLELGGQTYATSARINGQPISAIGVQLSPTGNA
LGTAKAVKAKLDELSKYFPAGVEYKIPYDTSKFVQISIEEVVKTLFEAMALVFLVMLVFL
QNIRYTLIPSIVVPISLLGAFATMNALGFSINVLTMFGLVLAIGILVDDAIVVVENVERI
MSQEGLPPREATRKAMGQITGAIIGITLVLMAVFIPMAFFSGSVGAIYRQFSLSMVASIF
FSALMALTLTPALCSTLLKPIEKGSHHEKKGFFGWFNRMFTSTTDRYQSLVERVLKKTFR
YMVIYGALIAAVVFLFMRLPSSFLPNEDQGYIITNIQLPPAASANRTLEVIKHVENYYQH
EKAVENIVAVQGFSFSGNGPNAALVFTTLKDWSSRGADQSADAVAGRAFGALFGGIRDAI
VFPLNPPPIPELGNATGFTFRLQDRGGLGHDALMAARNQLLGMAGQSKVLKNVRPDGLED
SPQYQVDIDREKANALGVAFADINNVLSTALGSAYANDFPNYGRQQRVIVQADRINRMQP
EDIMNLYVRNTQGSMVPMSAFAKGHWVVGPVQLVRYNGYPSVRISGDAATGASTGDAMDE
MEHLASRLPAGIGFEWTGQSLQEKSSGSQAPALYALSLLAVFLVLAALYESWSIPAAVIL
VVPLGVLGALLGVTLRFMPDDVYFKVGLIAVVGLSAKNAILIIEFAKDLQAQGKGLIEAT
LEAVHLRFRPIIMTSFAFILGVLPLAIATGASSASQRAIGTGVMGGMITATVLAVVLVPV
FFVVVRRIFKGSERQRRLDAAHLPLDEEI
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttttttatcgatcgcccggtctttgcctgggtgctcgcgctgttcatcatc
gtggctggggccatctcgatcacccagttgccgatcgcgcagtacccgaccatcgcgccg
ccctcgatcatcatcacggcaacctaccctggcgcgagcgccaaaacgctggacgacgcc
gtcaccagcatcatcgagcaggaaatgaacggtgcggacggcctgctctatatcgagtcg
gtcagccaggccggtaacggccaggccaccatcaccgtgacgttcaagcccggcaccgat
ccggcgctggcgcaggtggacgtgcagaaccgcctcaagcgcgtggaagcgcgcctgccg
tcgtcggtgacgcagcagggcgtgcaggtcgacaagacccgctccaacttcctgctgttc
gccacgctgatctcgaaggacggcaagatggacccggtcgccctgggcgactacatctcg
cgcaacgtgctcaacgaagtcaagcgcgtgcccggcgtcggccaggccgtgctgttcggc
accgagcgcgcgatgcgcatctggatcgacccggccaagctggtcggctacaagctgacg
ccgaccgacgtctacaacgccatccgcaaccagaacgcactggtctcggccggcacgctg
ggcgacctgccgtccacctccgaccagcccatcgcggcgacggtggtggtggaggggcag
atgacgaccaccgagcagttcggcaacatcgtgctggtgtccaagccggacggctcgcag
gtgcgcatcaaggacgtggcgcgcctggagctgggcggccagacctacgcgacttccgcg
cggatcaacggccagccgatctcggccatcggcgtgcagctctcgccgacgggcaacgcg
ctgggcacggccaaggcggtcaaggccaagctcgacgagctctccaagtacttccctgcc
ggcgtcgagtacaagatcccgtacgacacctccaagttcgtgcagatctcgatcgaggaa
gtggtcaagacgctgttcgaggccatggcgctggtgttcctggtgatgctggtgttcctg
cagaacatccgctacaccctgatcccgtcgatcgtggtgccgatctcgctgctgggcgcc
ttcgccaccatgaacgcgctgggcttctcgatcaacgtgctgaccatgttcggcctggtg
ctggcgatcggtatcctcgtcgacgacgccatcgtggtggtggaaaacgtcgagcggatc
atgagccaggagggcctgcccccgcgcgaagcgactcgcaaggccatgggccagatcacc
ggcgccatcatcggcatcacgctggtgctgatggcggtgttcatcccgatggcgttcttc
tcgggctcggtgggcgcgatctatcgccagttctcgctgtcgatggtggcctcgatcttc
ttctcggcgctgatggccctgacgctgacgcccgcgctgtgctcgacgctgctcaagccg
atcgagaagggctcgcaccatgagaagaagggcttcttcggctggttcaaccgcatgttc
accagcaccacggaccgctaccagagcctcgtggagcgcgtgctgaaaaagaccttccgc
tacatggtgatctacggcgcgctgatcgccgcggtggtgttcctgttcatgcgcctgccg
tcgtcgttcctgccgaacgaagaccagggctacatcatcaccaacatccagttgccgccg
gcggcatccgccaaccgcacgctggaggtgatcaagcacgtcgagaactactaccagcac
gagaaggccgtcgagaacatcgtggcggtgcagggcttcagcttctcgggcaacggtccc
aacgccgcgctggtgttcaccacgctcaaggactggagctcgcgcggcgccgaccagagc
gccgacgccgtggccggccgcgccttcggcgcgctgttcggcggcatccgcgatgcgatc
gtgttcccgctgaacccgccgccgatcccggaactgggcaacgcgaccggcttcacgttc
cgcctgcaggaccgcggcggcctcggccacgacgcgctgatggccgcgcgcaaccagctc
ctgggcatggccggccagagcaaggtcctgaagaacgtgcgcccggacggcctggaagac
tcgccccagtaccaggtcgacatcgaccgcgaaaaggccaacgcattgggtgtggcgttc
gccgacatcaacaacgtgctgtcgacggcgctgggctcggcctacgcgaatgacttcccg
aactacggccgccagcagcgggtgatcgtccaggcggacaggatcaaccggatgcagccg
gaagacatcatgaacctgtacgtgcgcaacacgcagggcagcatggtgccgatgtcggcg
ttcgccaagggtcactgggtggtcggcccggtgcagctggtgcgctacaacggctatccg
tcagtccgcatctcgggtgacgccgccaccggcgccagcacgggcgacgccatggacgag
atggagcacctggcctccaggctgccggccggcatcggcttcgagtggacgggccagtcg
ctgcaggaaaagtcctccggctcgcaggcgcccgcgctgtacgcgctgtcgctgctggcg
gtgttcctggtgctggccgcgctgtatgagagctggtcgatcccggccgcggtgatcctg
gtggtgccgctgggcgtgctcggcgcactgctgggtgtgacgctgcgcttcatgcccgac
gacgtgtacttcaaggtcggcctgatcgcggtggtgggcctgtcggccaagaacgccatc
ctgatcatcgaattcgcgaaggacctgcaggcgcaaggcaagggcctgatcgaagcgaca
ctggaagcggtgcacctgcggttccgcccgatcatcatgacgtcgttcgccttcatcctg
ggcgtgctgccgctggcgatcgccaccggcgccagttccgccagccagcgcgccatcggt
accggcgtgatgggcgggatgatcaccgcgacggtgctggccgtggtgctggtgcccgtg
ttcttcgtggtggtgcgccgcatattcaagggcagtgaacgccagcgccgcctggatgcc
gcacacctcccgctggacgaggaaatctga
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