Ralstonia pseudosolanacearum RS 476: CDC45_07135
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Entry
CDC45_07135 CDS
T05645
Name
(GenBank) type III effector protein hlk1
Organism
rpu
Ralstonia pseudosolanacearum RS 476
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AST26987
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Position
1477625..1479922
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AA seq
765 aa
AA seq
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MAGGRVGARAVRESAQTPVSADASTSTSAAASPPAAAARQAARPAELRGLASAPSSRASS
SSTGGLSRQASLPARAVARETPEAPVDVFNRTMRHVNAWRAVAERERKLEALGPEHKGLS
PEREMRYACDAIASIQTCLQALAAMKRQQEIPPGWDVDGQEAELLQLLIVAADIGVCTRH
ETLNKLADQDAVFRAQRSGTAEAETVSGPDGPRPDTIEEPEPAGATAPSPSEQAAISPLS
ALEREPGKIQAWLAEFTSCRSALDQIIRRAEVCGASRTVQTALDTMLPNAIYDKLRCCSG
MQALHGILAAASANRFVELSRQMALPDLAVRADELLAAWHKENAAMEAAVDALVMHGAPD
KPTQRLTPKALDGHQAVIEAYAEGLDRVGLNLCLDAAADIEMDDADGVWRSMMEVVHAIS
AYKASLLELSETAGRAKTQPEAPQPEPESSEAAPEPALSEPPPAARPAGASGGMRRKHRK
PGMRAAGPSVPEPVSARALVPADTRTVAQKQADTLLRRCRIDRATVAQLGGDIVELAQRL
GEDTRLVLSALNDRTRDAVIAAKFIWGSVGRWFGEPDRVRSAKASLHAGDHDRIGRLTNW
LGALELIERHMAPLEADMLKRDRYPKAKHLEKLLQAKGIEFVGVPGRLPPTEDVNAVGTL
FGMRIQFKPLSNRDQVAPWFVHLHTNRPVTAQALSTLAFEDFTAVHLKTDRDKNKGAQWE
AAMRALGYTEAKVHRAAIGEALLHKLFVQAAKQPRRNKGGVRPAG
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaggacgagtcggcgcgcgtgccgtccgggagtcggcgcagacgcccgtttcg
gcggacgcttcaacgagcacgagcgcggccgcgagcccaccggccgccgccgcacgccag
gccgcacgcccggccgagttgagggggcttgccagcgcgccgtcatcccgcgcgtcttcc
agctcgaccggcggcttgtcgcggcaagccagcttgccggcgcgtgccgtggcgcgggag
acgccggaagccccggtggatgtgttcaatcggaccatgcggcatgtcaacgcctggcgt
gccgtggccgagcgcgaacgcaagctggaagcgctggggccggaacacaaaggcttgagc
ccggagcgcgaaatgcgatatgcctgcgacgccatcgcttcgatccagacctgcctgcag
gcgctggcggcaatgaaacggcagcaggagattcctcccggctgggacgtcgacgggcag
gaagcagaactgttgcagttgctgatcgtcgcggccgatatcggtgtctgcacgcggcac
gagaccctcaacaaactcgcggaccaggacgcagtgttcagggcgcagcgttccggcacg
gcggaagcggaaaccgtttccggcccggacggccctcgccctgacacgatcgaggaaccg
gagccggcgggcgcgaccgcgccatccccatcggagcaagcggcaatcagcccgctgtcg
gcgttggagcgggagcccgggaagattcaagcctggctcgccgaattcaccagctgccgc
tcggcgctggaccagatcatccgccgcgccgaagtctgcggcgcgtcgcggacggtgcag
acagcgctcgacacaatgctgccgaacgccatctacgacaagctgcgctgctgcagcggc
atgcaggcgctccacggcattctcgctgcggccagcgccaaccggttcgtggagctctcc
cggcagatggcgctgccggacctcgctgtccgcgcggacgagctgctcgcggcatggcac
aaggagaacgccgcgatggaggccgcggtggacgcgctggtcatgcacggtgcgccggac
aagcccacccagcgcctgaccccgaaagcgctggacggccatcaggcggtgatcgaggcg
tacgccgaaggtctcgaccgggtgggcctgaacctgtgcctggatgccgccgccgatatc
gaaatggatgatgccgacggggtatggcgcagcatgatggaggtggtccatgcgatctcg
gcctacaaggcgtccttgctggagctgagcgaaacggccggccgcgccaagacccagccc
gaggcgccgcagcccgagcccgagtccagcgaggctgcgcccgagccggcgctcagcgag
ccgccgcccgcggcacgccccgccggggcttcgggcggcatgaggcgcaagcatcgcaag
cccggcatgcgcgctgccgggccgtccgttcctgagcccgtatccgcgcgcgcgctggtc
cccgcggacacgcgcaccgtggcacaaaagcaggccgatacgctgctgagacgctgccgg
atcgatcgcgccaccgtggcccagctcggcggcgacatcgttgagctggcgcagcggctc
ggcgaggacacccgcctggtcctgagcgcactgaacgaccgcacgcgggacgccgtcatc
gctgcgaagttcatctggggatcggtcggccgctggttcggcgagccggatcgcgtacgc
agcgccaaggcgtcattgcatgccggtgatcacgatcgcatcgggcggctgaccaactgg
ctcggcgcgctggagctgatcgagcggcatatggcgcccctggaagccgacatgctcaag
cgcgaccggtatccaaaggcgaagcacctcgaaaagctgctgcaggcaaaggggatcgag
ttcgtcggcgtaccgggccggttgcctcccacggaggacgtcaatgcggtgggcaccctg
ttcgggatgcgcatccagttcaagccgctgtccaatcgggatcaggtggcgccgtggttt
gtgcacttgcacacgaacaggccggtcaccgcgcaggcgctgtccaccctggcgttcgag
gatttcacggcggtccacctcaaaacggaccgggacaagaacaagggcgcgcaatgggag
gctgcgatgcgcgcgctgggctacaccgaggccaaggtgcaccgtgccgccatcggcgaa
gcgttgctgcacaaactgtttgtgcaggcagcgaaacagcccaggcggaacaaggggggc
gtgcgcccggccggatga
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