Ralstonia pseudosolanacearum RS 476: CDC45_07785
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Entry
CDC45_07785 CDS
T05645
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
rpu
Ralstonia pseudosolanacearum RS 476
Brite
KEGG Orthology (KO) [BR:
rpu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpu01011
]
CDC45_07785
Enzymes [BR:
rpu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CDC45_07785
Peptidoglycan biosynthesis and degradation proteins [BR:
rpu01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CDC45_07785
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
Motif
Other DBs
NCBI-ProteinID:
AST27104
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All DBs
Position
1617218..1618750
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AA seq
510 aa
AA seq
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MRSVRLLAASVFSLLLAACATGPAPNADTASTSAVSSTSGKDAPVVNVDQQPVASLKGPA
KDLWARIRQGFSMPDLQSSAVDDRADWYAQRPEAFRRMVDRSNRYLYHIVEELERRNMPT
ELALLPFVESAFNPQAVSSAKAAGMWQFIPSTGKTYNLRQNVFQDERRDVLASTDAALDY
LSKLHDQFGDWQLALAAYNWGEGAVARAIARNQAAGLSADYLNLNMPAETRMYVPKLQAI
KNIITSPERYGITLPDIPNHPYFVTVTTSRDIDVTLAARLANLPIDEFKALNPSFNRPVI
LGASNPQILLPYDNAETFQYNLNTYRGGLSSWTAVTVGNRERVEALAARLKVDPDTIREI
NRIPKGMRLKAGSTVVVPRAEDAKEDAPDISPELAENATMTVEPDVPDLRRVVVRAGRRD
TLAGLSHRYGVSVAQLRAWNQLSGDAIPKGRNVVLMLPQARSGAQVRAVRVSAMSRPVAS
AVRVPVAKVAGKPVARAKPVASASAKRRKR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgcgatccgtgcgacttctcgcggcatctgtgttcagtctgcttctggcagcctgtgcc
acgggccccgctccgaatgccgacaccgccagcacaagcgccgtttcctccacgtccggc
aaagatgcgccggtcgttaatgtcgatcagcagcccgtggcctccctcaaggggccggcc
aaggacctgtgggcgcgcatccgccaaggtttctccatgcccgacctgcagagttcggcc
gtggacgaccgcgccgactggtatgcccagcgccccgaggcgttccgccgcatggtggac
cgctccaaccgctacctgtatcacatcgtcgaggaactcgaacggcgcaacatgcccacc
gaactggccctgctgccgttcgtggagagcgcgttcaacccgcaggcggtctccagcgcc
aaggcggccggtatgtggcagttcatcccgagcaccggcaagacctacaacctccggcaa
aacgttttccaggacgagcgccgcgacgtgctggcctcgaccgatgccgcgctggactac
ctgtccaagctgcacgaccagttcggcgactggcaactggcgctggccgcctacaactgg
ggcgagggcgcggtggcgcgggcgatcgcgcgcaaccaggcggccgggctgtcggccgac
tacctcaacctgaacatgcccgccgagacgcgcatgtacgtgcccaagctccaggcgatc
aagaacatcatcaccagcccggagcgctatggcatcacgttgccggacatccccaaccac
ccgtacttcgtcaccgtcaccacctcgcgcgacatcgacgtgacgctggcggcgcggctg
gccaacctgccgatcgacgagttcaaggcgctgaatccgtcgttcaaccggccggtcatc
ctgggcgcgtccaacccgcaaatcctgctgccgtacgacaacgccgagacattccagtac
aacctcaacacctatcgcggcgggctgtcgagctggactgccgttacggtcggcaaccgc
gagcgcgtcgaggcgctggccgcgcggctcaaggtcgatccggacaccatccgcgagatc
aaccgcattcccaagggcatgcgcctgaaggccggctccaccgtggtggtgccgcgcgcc
gaggatgccaaggaggacgcccccgacatcagccccgagctggccgagaacgccaccatg
acggtcgagcccgacgtgcccgacctgcgccgcgtggtggtgcgcgccggcaggcgggat
acgctggcgggcctgtcgcaccgctatggcgtgtcggtggcgcagctgcgcgcgtggaac
cagctgtccggagacgcgatcccgaaggggcgcaacgtggtcctgatgctgccgcaggcg
cgctcgggcgctcaggtgcgcgcggtgcgggtctcggcgatgtcgcgtcctgtggcatcg
gcggtgcgggtgccggtggcgaaggtggccggcaagccggtggccagggccaagcccgtg
gcaagcgcgtcggccaagcgcaggaagcgctga
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