Rhodopseudomonas palustris DX-1: Rpdx1_2132
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Entry
Rpdx1_2132 CDS
T01381
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rpdx1_2132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpx03400
]
Rpdx1_2132
Enzymes [BR:
rpx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Rpdx1_2132
DNA repair and recombination proteins [BR:
rpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Rpdx1_2132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ADU43729
UniProt:
E6VQ52
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All DBs
Position
2292559..2293329
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AA seq
256 aa
AA seq
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MKIATFNVNNVNKRLPVLLAWLKAARPEIVCLQELKAADADFPEAALRRAGYTAAWAGQK
SWNGVAILARRREIVVTRRRLPGAPHDKQSRYIEAAVAGIIVGCLYAPNGNPQPGPKFDE
KLAWLKRLNRHAATLLKSGAPVVLAGDFNVVPTPADIYPTKSWDKDALVQPAPRKLFAAL
LRQGWTDALRHCHPDDAPYTFWSYWRKRFERDAGLRIDHLLLDPSLALRLKRAGVDRKVR
AAPEASDHAPAWIMID
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatcgcgaccttcaacgtcaacaatgtcaacaagcggttgccggtgctgctggcg
tggctgaaggcggcgcggccggagatcgtctgcttacaggagctgaaggcggccgatgcg
gactttccggaagcggcgctgcgcagagcgggctatacggcggcgtgggccgggcagaaa
agctggaatggcgtggcgatcctcgcccgccgccgcgagatcgtggtgacccggcgccgg
ctgcctggcgcgccccacgacaagcagagccgctacattgaggcggcggttgccgggatc
atcgtcggctgcctgtacgcgcccaacggcaacccgcagccggggccgaaattcgacgag
aaactcgcctggctgaagcggctgaaccgccatgcggcgacgctgctgaagagcggtgcg
cctgtggtgctggccggcgacttcaacgtggtgccgacgccggccgatatctacccaacg
aaatcatgggacaaggacgcgctggtgcagccggcgccgcgcaagctgttcgcggcgttg
ctgcgccagggctggaccgatgcactgcggcactgccatccggacgacgcgccatacaca
ttctggtcgtattggcgaaaacggttcgagcgcgacgcgggcttgcggatcgaccacctg
ctgctcgatccgtcgctggcgctgcggctgaagcgggccggcgtcgatcgcaaggtgcgg
gcggcgccggaggcgagcgatcacgcgcccgcctggatcatgatcgactaa
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