Rhodopseudomonas palustris DX-1: Rpdx1_2331
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Entry
Rpdx1_2331 CDS
T01381
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
rpx
Rhodopseudomonas palustris DX-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIG
TIG_SUH
Motif
Other DBs
NCBI-ProteinID:
ADU43922
UniProt:
E6VDI8
LinkDB
All DBs
Position
complement(2502407..2507317)
Genome browser
AA seq
1636 aa
AA seq
DB search
MAALAPSLSWAASAGCNAVNGGALNYTVSFSTPDTPDDGQGYKSTQVTGFATGDIINYSV
TINPTAGSIEAGFLADFSFGIPTGFNNNTGGGFSSSVTGQYQLTSIDVSDIDSTSGLYAE
AFYGNFQGFTGSVSLAATCTAAGTPAVTAVAPSSGPTAGGTSVTITGTNFTGATSVSFGA
TSVPSSSFTSSSGTQIVVPSPAGSAGTVHVTVTNATGTSPTNSNDQFTYVAAPTIGTISP
SSGPVAGGTSVTITGTNLSGVTGVTVGGAAATLGTNTSTSIQITTPAGTAGARDVVLTTA
GGSVTSTGGFTYLAAPTIDTITPNSGPVAGGTSVTITGTDLSGVTGVTVGGVAATLGTNT
STSIAITTPAGTAGAQNVVVTTAGGSATSTGGFTYIAAPTIGTISPSSGPVAGGTSVTIT
GTNLSGVTGVTVGGAAATLGTNTSTSIQITTPAGTAGARDVVLTTAGGSVTSTGGFTYVA
APTIGTISPSSGPVAGGTSVTITGTNLSGVTGVTVGGAAATLGTNTSTSIEITTPAGTAG
ARDVVLTTAGGSVTSTGGFTYIAGPAISTISPSAGPTAGGTSVTITGTNLSGVTSVTVGG
ASATLGTNTSTSIQITTPAGTAGARDVVLTTAGGSVTSTGGFTYAAAPTIGTITPSSGST
GGGTSVTITGTNLSGVTSVTIGGATATLGTNTSTSIEITTPAGTAGARDVVLTTAGGSVT
STGGFTYILSPSISTVSPNAGPTAGGTSVTITGTNLSGVTSVTIGGAAATLGTNTSTSIV
VTTPAGTAGARDVVVTTAGGSVTSTGGFTYAGPPAISTISPSSGPTGGGSSVTITGSDLA
GVISVTIGGAAASLGTNTATSIVITTPAGTAGARDVVLTTAGGTTTSTAGFTYVAGPTIG
TIAPNSGPAAGGTSVTITGTDLSGVTAVTVGGAAATLGTNTATSIMITTPAGSAGARDVV
VTTAGGSATSTGGFTYIATATVTSIAPAAGPISGGTSVTITGTNLSGATAVTIGGAAATN
VIVINATTITATTPAHAAGTVDVVVTTPGGTATGAGLYSYAAGPTVTSVSPASGPSVGGT
SVTITGSNLTGATAVSFGGAAATAVSVTSATSMTATTPAHAVGVVDVTVTTPGGSSTGAG
LFSYIVAATTTTLSSSRNPSEAGQAVSFTATVTASGAVPTGTVTFTDGGVTIGSVALSGG
TATFTTSSLTVGSHTIVAAFAANASFAASASPPLLQAVNTPQDSLKLRAMQILASKTVAQ
TSGAAISGAIDTAISEGFNDGGELITPSGTGLRLNFTDDLSQGRAGTTASAIESRWPGSG
LRSDGPATPAIGLGIGIPGPAGRGRSRFDDTFAAIDRSSAAKAPAKRLTEPKDWLMWAEV
KGAGIGQWNATGATSVLSGNQVNALIGLTRKPSPDFLIGLLGGYETFDYRSDTLNGRLRG
DGWTIGSYAAWRSAAGLRVDIAGAYSGIDYNGSAGSAAGKFQGQRWLLSGGLTGTTEAFG
FAIEPSAKVYALWERQNAYVDSLGTPQAQREFFTGRASAGLKVSYPWLYSATLTLSPYAG
VNADYYFLGDNAETITLAGATPLASVPLLDGWSARVTGGLAARFGNGAAIAFGGEMGGLG
GTVQIWTLRGRASVPF
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcactggcaccctcgctgagctgggcggcgtctgcgggctgcaacgccgtgaac
ggcggcgcactcaactacacggtctcgttttcgacgcccgatacgccggatgatgggcag
ggctacaagagcacacaggtcacagggttcgctacgggcgacatcatcaactattcggtc
accatcaacccgacggccggatcgatcgaggcaggctttctagccgacttcagcttcgga
ataccaacgggcttcaacaacaacacaggcggcggcttttcgtcgagcgtcacggggcaa
taccaattgacgtcgatcgacgtcagtgacatcgactcgacctcagggctctatgcagag
gcattttacgggaatttccaaggattcaccggtagcgtttcgcttgcagcgacctgcacc
gcggcaggcaccccggccgtcaccgcggtcgcgccgtcctcaggccccacggcgggtggc
acctcggtgaccatcaccggcacgaatttcaccggcgccacgtcggtgagcttcggcgcg
acgtcggtgccgagttccagtttcaccagcagttccgggacacagatcgtcgtgccctcg
ccggccggcagcgccgggacggtccacgttacggtgaccaacgccaccggcacatccccg
accaattcaaacgatcagttcacctacgtcgcggcgccgaccatcggcacgatctcgcct
agttccggcccggtcgcaggcggcacctcggtgaccatcaccggcaccaacctgtccggg
gtcaccggcgtgaccgtcggcggagcagcggcaacactcggcaccaatacgtcgacatcg
attcagatcacaacgccggccggcacagccggcgcgcgcgacgtcgtgctgacgacagcg
ggaggttcggtcacctcgaccggcggcttcacctatctggcagccccgacgatcgacacg
attacgccgaactcgggcccggtcgcgggcggcaccagcgtcaccattacgggcaccgat
ctgtcgggcgtcacaggcgtgaccgtcggcggcgtcgcagcgacgctcggcaccaacacc
tcgacttcgatcgcaatcacaaccccggccggcacggcaggcgcgcagaacgtggtggtg
acgacggccggcggttcggcgacgtcgaccggcggattcacctatatcgccgcgccgacc
atcggcacgatctcccccagttccggcccggtggcgggcggcacctcggtgaccatcacc
ggtaccaacctgtccggggtgaccggcgtgaccgtgggcggagccgcggcgacactcggc
accaatacgtcgacctcgattcagatcacaacgccggctggtacggccggcgcacgcgac
gtcgttctgaccacggccggcggctcagtgacctcgaccggcggcttcacctatgtcgcg
gcgccgaccatcggcacgatatcgcccagttccggcccggtggcaggcggcacctcggtg
actatcaccggcaccaacctgtcaggggtgaccggcgtgaccgtgggcggggccgcggcg
acgctcggcaccaacacgtcgacgtcgatcgagatcaccaccccggccggaaccgccggc
gcgcgcgacgtcgtcctgaccacggccggcggctcagtgacctcgaccggcggcttcacc
tacatcgccggtccggccatcagcacgatttccccgagtgccggccccacagcgggtggt
accagcgtcaccatcaccggcaccaacctgtccggcgttacgtcggtgacggtcggcggc
gcatcggcaaccctcggcaccaatacatccacctcgattcagatcacgacgccggccggc
accgcaggcgcgcgggatgtcgtactgaccacggccggcggctcggtcacatcgaccggc
ggcttcacctatgcggcggccccgacgatcggtaccattacgccgagttccggctccacg
ggcggcggcacctccgtcaccatcaccggcaccaacctgtccggcgtcacgtcggtcacc
attggcggcgcgaccgcaacgctcggcaccaacacgtcgacgtcgatcgagatcaccacc
ccggccggaaccgccggtgcgcgtgatgtcgtactgaccacggcaggcggctccgtcacc
tcgaccggcggtttcacctatatcctgtcgccgtcgatcagcacggtttctccgaatgcg
ggtccgaccgccggtgggacatcggtgacgatcaccggtaccaatctgtcgggcgtcacc
tcggtcaccattggcggcgcggccgcaacgctcggcaccaacacgtcgacgtcgatcgtc
gtgacgacgccggccggcacagccggcgcacgcgacgtcgtggtgacgaccgccggcgga
tcggtcacctcgaccggcggcttcacctatgctggtccgccggcgatcagcacgatctcg
cccagctcggggccgaccggcggcggctcctccgtcaccatcaccggcagcgatcttgcc
ggcgtgatttccgttaccatcggcggcgctgccgcgtcgctcggcaccaacacagcgaca
tcgatcgtgatcaccacgcccgcaggcaccgccggtgcacgcgacgtcgtcctgaccaca
gccggagggacgacgacgtccaccgcaggattcacctatgtggcaggaccgacgatcggt
acgattgcgccgaactcgggcccggcagccggcggcacgtcggtgacgatcaccggcacc
gacctttcgggcgttactgccgtgacggtcggcggggcggcggcaacgctcggcaccaat
acggcgacctcgatcatgatcacgacgccggcgggctccgcgggcgcacgcgacgtcgtg
gtgaccacagccggcggctcagccacttcgaccggaggcttcacctatatcgcgacagcg
accgtgacgtcgatcgcgcccgcagcaggcccgatcagtggcggcacctcggtgaccatc
actggaacgaacttgagcggcgcaacagccgtgaccatcggtggcgccgccgctaccaac
gtcatcgtcatcaatgccaccacaatcacggcgaccaccccggcccacgccgcgggaacc
gtcgatgtcgtcgtcacgacaccgggcggcaccgccacaggagcaggactctacagctac
gcggccggccctacggtcacctcggtcagtccggccagcggtccgagcgtgggcggcacc
tcagtcacgatcaccggcagcaacctgaccggcgcgaccgcagtcagtttcggcggtgcc
gcggcgaccgccgtcagcgtgacaagcgcaacctcgatgaccgcaaccacccccgcccat
gcggtcggcgtcgtcgacgtcaccgtcaccactcccggcggcagcagcaccggcgcagga
ctgttcagctacatcgtggcagccacgaccaccaccctctcctcgtcgcgcaaccccagc
gaggcgggccaggcagtgagcttcaccgcgacggtgacggcaagcggcgcggtccccacc
ggcaccgtcaccttcaccgatggcggggtcacgatcggctcggtcgccctgtcgggcggc
accgcgacgttcaccaccagcagcctgacggtcgggtcgcataccatcgtcgcggccttc
gcggccaacgccagtttcgccgccagcgcctcgccgccattgctgcaggccgtgaacacg
cctcaggacagcctgaagctgcgcgccatgcagatcctggccagcaagaccgtcgcgcaa
acctccggtgcggccatctccggcgctatcgacaccgcgatctccgaaggcttcaacgac
ggaggcgaactgatcaccccgtccggaacgggcctgcgcctgaacttcaccgacgatctg
tcgcaaggcagagccggcaccacggccagcgcgatcgagagccgctggccgggatctggc
ctgcgcagcgacgggcccgccaccccggcgatcgggctcggcatcggcatccccggaccg
gccgggcgcggtcgctcacggttcgacgacaccttcgcagcgatcgatcgcagctccgcc
gccaaggcccccgccaaacggctgaccgagccgaaggattggctgatgtgggccgaggtg
aagggggccggcatcggccaatggaatgcgaccggggccacctcggtgctatccggcaac
caggtcaacgcgttgatcggactgacccggaagccgtcgccggacttcctgatcggcctg
ctcggcggctacgagaccttcgactacaggtcggacacgctcaacggccggctcaggggc
gacggttggacgatcggctcctatgccgcgtggcgatcggccgccgggctgcgcgtcgac
atcgcgggggcgtattcggggatcgactacaacggctcggcaggcagcgccgcgggcaag
ttccaggggcagcgctggctgctgtccggaggactgaccggaaccaccgaagcgttcggc
tttgcgatcgagccctcggcgaaggtctatgcgttgtgggaacgccagaacgcctacgtc
gactcccttgggacgccgcaagcgcaacgcgagttcttcaccgggcgggcctcggccgga
ctcaaggtgagctacccctggctgtacagcgcgacgctgacgctgtcgccttatgcgggc
gtcaacgccgactattacttcctcggcgacaatgccgagacgatcacgctcgcaggcgcg
acgccgctggcgtcggtgccgctgctcgacggatggtccgcgcgagtgactggcggcctc
gccgctcggttcggcaacggcgcggcgattgcgttcgggggcgaaatgggtggactgggc
ggcaccgttcagatctggacgctgcgcggcagggcctcggtgccgttctga
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