Rhodopseudomonas palustris DX-1: Rpdx1_2343
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Entry
Rpdx1_2343 CDS
T01381
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rpdx1_2343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpx03032
]
Rpdx1_2343
Enzymes [BR:
rpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Rpdx1_2343
DNA replication proteins [BR:
rpx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Rpdx1_2343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
nSTAND3
AAA_22
TniB
AAA
NACHT
AAA_16
AAA_30
RuvB_N
SLFN-g3_helicase
NB-ARC
AAA_19
IstB_IS21
DUF5612
TsaE
DUF6200
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ADU43934
UniProt:
E6VDK0
LinkDB
All DBs
Position
complement(2518148..2519644)
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AA seq
498 aa
AA seq
DB search
MAATDSNVLKLAPEPGVPAYRTAPHNIEAEQALLGAILVNNDAFYRVSDFLEPKHFFEPI
HQTIFETAASIIRAGKIATPVTLKTFLAADLDLGGLTVAQYLARLAAEATTIINAQDYGR
TIYELSLRRDLIGIGTDMVNVAYDAPVDFAPRNQIEDAERRLYELAESGRYDGGFQKFSQ
ALTTAVDMAAKAFQRDGKLSGISSGLRDLDTRMGGLQHSDLIVLAGRPGMGKTALATNIA
YNVAKAYRGEVQPDGSTKTVNGGIVGFFSCEMSAEQLATRILAEQAEIASSKIRRGGISE
ADFDKIRDVSIELQSLPLFVDETGGLSIAQLTARARRLKRQKGLDMLVVDYIQLLQGSSK
KGDNRVQEVTEITTSLKALAKELNIPVIALSQLSRQVESRDDKRPQLADLRESGSIEQDA
DVVMFVYREEYYLQNKEPRPGTPEHEKWATDMELVHGKAEVIIAKQRHGPTGTVDLQFEG
QFTRFSDLTDDSHLPERI
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaaccgattcgaacgttctgaagcttgcgccggaacccggcgtgccggcatac
cggaccgcgccccacaacatcgaggccgagcaggccctgctgggcgcgatcctggtcaac
aacgatgcgttctatcgggtgtcggacttcctcgagccgaaacatttcttcgagccgatc
catcagaccatcttcgaaaccgcggccagcatcatccgagccggcaagatcgcgaccccg
gtcacgctgaagacgttcctggcggccgatctcgatctcggcggcctcacggtcgcgcag
tatctggcgcggcttgccgccgaagccactaccatcatcaacgcccaggactatgggcgg
acgatctacgagttgtcgctgcgccgtgatctgatcggcatcggcaccgacatggtcaac
gtcgcttacgacgctccggtcgacttcgccccgcgcaatcagatcgaggacgccgagcgc
cggctgtacgagctggcggaatccggccgctacgacggcggtttccagaaattctcccag
gcgctgaccaccgccgtcgacatggcggcgaaggcgttccagcgcgacggcaagctgtcc
ggcatctccagcggattgcgcgacctcgacacccggatgggcggcttgcagcactccgac
ttgatcgtgctcgcagggcgccccggtatgggcaagaccgcgctggccaccaacatcgcc
tacaatgtcgccaaggcctatcgcggcgaggtgcagccggacggctcgaccaagaccgtc
aacggcggcatcgtcggcttcttcagttgcgaaatgtcggccgaacagctcgcgacccgt
attctcgccgagcaggccgagatcgcctcgagcaagatccgccgcggcggcatctcggaa
gccgacttcgacaagatccgcgacgtttcgatcgagttgcagtcgctgccgctgttcgtc
gacgaaaccggcggcctgtcgatcgcgcagctcaccgcccgcgcccgccgcctgaagcgg
cagaagggcctcgacatgctggtggtcgactacatccagctcttgcagggctcgagcaag
aagggcgacaaccgcgtccaggaagtcaccgagatcaccaccagcctcaaggcgctggcg
aaggaattgaacatcccggtcatcgcgctgtcgcagctttcgcgtcaggtcgaatcccgc
gacgacaagcggccgcagctcgcggacttgcgtgaatcaggttcgatcgagcaggacgcc
gacgtggtgatgttcgtgtaccgcgaagaatactatctgcagaacaaggagccgcggccg
ggcactcccgaacatgagaagtgggcgaccgacatggagctggtccacggcaaggccgaa
gtgatcatcgccaagcagcgtcacggtccgaccggcaccgtcgatctgcagttcgaaggt
cagttcacccgcttcagcgatctcaccgacgacagccatctgccggaacgtatttga
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