Rhodopseudomonas palustris DX-1: Rpdx1_3312
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Entry
Rpdx1_3312 CDS
T01381
Name
(GenBank) putative methylase/helicase
KO
K26273
protein strawberry notch
Organism
rpx
Rhodopseudomonas palustris DX-1
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rpx03036
]
Rpdx1_3312
Chromosome and associated proteins [BR:
rpx03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
Rpdx1_3312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADU44883
UniProt:
E6VQ93
LinkDB
All DBs
Position
complement(3538424..3542779)
Genome browser
AA seq
1451 aa
AA seq
DB search
MTRFHSAAAVTACMRLPAPQAARADASRILAAARLILPQLESGRRLSAGDLRAAMEAVFD
GSDAGGAWDWKSAYEACEVATVLFLRRYGSSMWKRAVSPGAMLPLLGKIARLLPTHTKRS
EESAALQQFSTPIELGWAACTAAAITPADTVLEPSAGTGLLAILAELAGAGLVLNELAET
RAELLALLFPDIALTRYDAAHIDDHLDPGVTPSVVLMNPPFSALAHVDRRMADATLRHMS
SALVRLADGGRLVAITGASCGPDQPAWRDAFISLQQRGRVVFSAAIDGSVFVKNGTTIDT
RLTVIDKRPADDPGTFPVSPGRVPDKATLLRSIVQSVPPRPSVSLPSIVRAAGTPAARLG
RTRKLAIARPSSFPADSRPAEAIELNYETLDWTPAETGTITDALYEAYELQSIRIPGARA
HPTRLVQSAAMASVAPPKPSYRPHVSPDLVESGLLSDAQLETVIYAGEAHSRLLAGSWNV
DATFDIVSAAPEDAEDAVRFRLGFMLGDGTGAGKGRQVAGILLDNWLKGRRKAVWISKSD
KLIEDAQRDWAALGQERLLVTPLSRFRQGTPIRLTQGILFTTYATLRSDARDAKISRVQQ
IVEWLGAKFDGVIIFDESHAMQTAAGGKGERGEQAASQQGRAGLRLQHALPNARVLYVSA
TGATTVHNLAYAQRLGLWGGHDFPFATRAEFVEAIEAGGVAAMEVLARDLKALGLYAARS
LSYDGVAYELVEHRLSDEQIRIYDAYAGAFGIIHNNLDAALRAANVTGTTGTLNAQAKSA
ARSAFESAKQRFFNHLITAMKVPSLIASVGRDLKDGHAAVIQIVSTGEALMERRLAEIPT
EDWGDVQVDITPREYVLDYLAHSFPTQLYEPFTDSEGNLSSRPVFRDGQPVQCRDAVARR
DDLIEQLASLPAVHGALDQIVQRFGTDLVAEVTGRSRRIVRKTGSDGINRLVVENRAGSA
NLGEARAFMDDAKRILVFSEAGGTGRSYHAELSARNQRLRVHYLLEAGWKADAAIQGLGR
TNRTNQAQPPLFRPIATNVKAEKRFLSTIARRLDTLGAITKGQRQTGGQGLFRAEDNLES
AYARDALRQLYILLVNGKIAECSLQTFEDATGLKLIDSNGIKDDLPPITTFLNRLLALTI
DLQNILFTAFEQLLTARVEGAIASGTYDVGLETLTAESFSVTGRRSIYTHPGTLAETTLL
TIAQRERNRPVALDEALHRGADPRAQLLVNSQSGRAAVQIPARSVMSDDGEVERRVRLIR
PMEHPSLPLTMMPQTHWQEADREAFCRAWTAEVAEVPKFSDSEIHIVAGLLLPIWKRLPN
ESTRVFRLQTDAGERIIGRKVSPAWAAMASDTGVASIAPDAAFAALRDGKTILVLAESLQ
LRRVRVMGANRIELIGFSEAMRDRLRAYGLFSEIISWKLRFFVPVDATGPAVLAKVLEHY
PVLRLADRGEP
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgacccgattccattccgccgcggccgtgaccgcgtgcatgcgacttcccgcgcctcag
gccgcccgtgctgatgcatcgcgcatcctcgccgcggcgcggctgatcctgccgcagctc
gaaagcggccgccgcctgagtgcgggcgatctgcgcgccgcgatggaggccgtatttgac
ggttctgacgcgggcggtgcctgggactggaaaagcgcctatgaggcttgcgaagtcgcg
accgtcctatttttgcgcagatatggttcgtcgatgtggaaacgcgccgtgtcgcccggc
gccatgttgccgctgctggggaaaatcgcgcggctgcttcccacccataccaagcgatcc
gaggagagtgcagcgctgcagcaattcagcacgccgattgagcttggatgggcggcctgt
accgccgcggcgatcacgccggccgacaccgtcctcgagccttcggccggcactggattg
ctcgccatccttgccgaattggctggcgctggccttgtcctcaatgaactcgccgagacc
cgcgcggaactgctggcgctgctgtttcccgacatcgccctgacacgttacgacgcggcg
cacatcgacgatcacctcgaccccggtgtcacgccgagcgtggtgctgatgaacccgccg
ttttcagcgctcgcccatgtcgatcgacgaatggcggacgccacgttgcgccacatgtcg
tccgctctggtacggctcgccgatggcggtcgcctggttgcgattacaggggccagttgc
gggccggatcagcctgcgtggcgggatgccttcatcagcttgcagcagcgcgggagagtc
gttttctcagcagcgattgatggatcggtatttgtcaaaaacggcacgaccatcgacacc
cgcttgaccgtcatcgacaaacggccggcggatgatcctgggacgttcccggtgtcgccg
ggtcgagtgccggataaagcgacgctgctaaggtcgatcgtgcaatccgtgccgccacga
ccgtcggtttcgctgccgtcgattgtccgggcagccggcacaccggccgccagactcggt
cgcacgcggaagcttgccatcgctcggccttcctccttcccggccgattctcgcccggcc
gaggcgatcgaactgaattatgagacgctggattggacgccagccgaaaccggcaccatc
accgatgcactttatgaagcctacgagctgcagagcatccgaattcccggcgctcgagcg
cacccgaccagactggtgcagtcggcggcgatggcgtcggtcgcaccaccgaagccgagc
tatcgtccgcacgtttcgcctgacctcgttgagagcggactgctgtcggacgcgcagctg
gaaaccgtgatctatgccggagaggcgcattcccgccttctcgctggatcatggaatgtc
gacgccacgttcgacatcgtcagtgcagcgcccgaagacgccgaagacgctgtccgcttc
cgcttgggctttatgctcggcgacggcacgggggccggcaagggacgacaggtcgctggc
atcctgctcgacaattggctgaagggacggcgcaaagcggtctggatcagcaagtccgac
aagctgatcgaggatgcccagcgcgattgggcggcgctcggtcaggaacgactgctggtg
acgccattgtcgcggtttcggcaggggactccgatccgtctgacacaaggcatccttttc
accacctatgccacgctgcggtccgacgcgcgtgacgccaagatatcgcgggtgcagcag
atcgtggaatggttgggcgccaaatttgatggcgtgatcatcttcgacgagtctcacgcg
atgcagactgccgcgggcggcaaaggtgaacgcggcgagcaggcggcgtcgcagcagggc
cgcgctggcctgcgcctgcagcatgcgctgcccaatgcgcgtgtcctttacgtgtcggcg
actggcgccaccacggtgcataatctggcttacgcccagcgcctcggattgtggggcggc
catgactttccgtttgccacccgcgccgaatttgtcgaagcgatcgaggctggcggcgtg
gcggcgatggaggtgctggctcgcgatctcaaggcgctcgggctctacgccgcgcgttcg
ctgtcctacgacggcgtcgcttacgaactcgtcgagcatcggctcagcgacgagcagatc
cggatttacgacgcctatgcgggcgcgttcggcatcatccacaacaacctcgatgccgcg
ctgcgcgctgccaatgtgacaggcacgaccggcacgctgaacgcacaagccaaatcggct
gcaagatccgcattcgaatccgccaagcagcggttcttcaatcatctgatcaccgcgatg
aaagtaccttcgctgatcgcatcggtcggtcgcgatttgaaggacggccatgccgcggtg
atccagatcgtctcgaccggcgaagcgctgatggagcgtcggcttgccgaaatcccgacc
gaagactggggtgacgttcaggtcgacatcaccccgcgggaatatgtgcttgactatctg
gcgcattcgttcccgacccagctctatgagccgttcaccgacagtgagggcaatctgtcg
tcgcgcccagtgttccgggatggccaaccggtgcaatgccgggacgcggtcgcccggcgg
gacgatctgatcgagcagctcgcgtcgctgccggcggtgcatggagcgctcgaccagatc
gtgcagcggttcggcaccgatctggtggcggaagtgaccggccgctcgcggcgcatcgtc
cgcaagaccggctccgatggcatcaatcgcctggttgtcgagaatcgtgccggctccgcc
aatctcggcgaagcccgggccttcatggacgacgccaagcgcatcctggtgttttcggaa
gcgggcgggaccggacgctcctatcacgccgagctgtcggccaggaaccagcgcctgcgg
gtgcactatctgctggaagccggttggaaggcggatgcggcgatccaggggcttggccgc
accaaccggaccaatcaggcgcagccaccgctgtttcgcccgatcgccaccaatgtgaaa
gccgagaagcgctttctgtcgacgatcgcgcgaaggctcgacacgctgggcgcgatcacc
aagggccagcgtcaaactggtgggcagggactgttccgggcggaagacaatcttgaaagc
gcctacgcgcgcgatgccctgcggcagctgtatattctgctggtgaacggcaagattgcc
gaatgttcgctgcagacgttcgaggacgcgaccggactgaagctgatcgattcaaacggc
atcaaggacgacctgccgccgatcacgacgttcttgaaccggctgctggcgctcaccatc
gatctccagaacatcctgttcaccgcgttcgagcaattgctgaccgcgcgcgtcgagggt
gcgatcgcatccggcacctacgacgttggcctggagacgctcaccgccgagagtttttcc
gtcaccggccggcggtcgatctacacccatcccggcaccttggccgaaaccacactgctc
accatcgcgcaacgcgagcgcaatcggccggtcgcgctcgacgaggctctgcatcgcggg
gccgatccccgcgcgcagcttctggtcaacagccagtccggccgcgccgctgtgcagatc
ccggcccgtagcgtgatgtccgacgacggcgaagtggagcgccgcgtccggctgatccgg
ccaatggagcatccgagcttgccgctcacgatgatgccgcagacccactggcaggaagcc
gatcgggaggcgttctgccgcgcctggacagcggaagtggcagaagtcccgaagttcagc
gacagcgagattcatatcgtagccggtttgctgctgccgatctggaagcggctgccgaac
gagtcgacgcgggtcttccggctgcagaccgatgccggcgaacgcatcatcggccgcaag
gtttcaccggcctgggcggcgatggcgagtgacaccggcgttgcgagcatcgcccccgat
gccgcgttcgctgcgttgcgcgatggcaagacgatccttgtgctcgctgaatccttgcag
cttcggcgggtccgcgtgatgggggcgaaccggatcgagttgatcggcttttccgaggcg
atgcgcgatcggctacgggcctatggtctctttagcgagatcatctcgtggaagttgcgc
tttttcgtgccggtcgatgccaccggtcctgccgtcctcgcgaaagtgctggagcactat
cccgttctgcggctcgccgatcgaggcgagccgtga
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