Rhodococcus pyridinivorans SB3094: Y013_06815
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Entry
Y013_06815 CDS
T02974
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy00250
Alanine, aspartate and glutamate metabolism
rpy00410
beta-Alanine metabolism
rpy00430
Taurine and hypotaurine metabolism
rpy00650
Butanoate metabolism
rpy01100
Metabolic pathways
rpy01110
Biosynthesis of secondary metabolites
rpy01120
Microbial metabolism in diverse environments
rpy02024
Quorum sensing
Module
rpy_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Y013_06815
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Y013_06815
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Y013_06815
00430 Taurine and hypotaurine metabolism
Y013_06815
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Y013_06815
Enzymes [BR:
rpy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
Y013_06815
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AHD20397
UniProt:
V9XGG4
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Position
complement(1425623..1427002)
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AA seq
459 aa
AA seq
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MSESNAPAETLAPAFTGRLGTDPIPALRLPKSETDPEATYQFIHDELMLDGSSRLNLATF
VTTWMDPQAGRLMAETFDKNMIDKDEYPATAEIETRCVNMVAALFHAENLDPADPSSATG
VSTIGSSEAVMLGGLALKWRWREARRAAGKDASKPNLVLGSNVQVVWEKFCRYFDVEPKY
LPMEPGRYVITPEQVREAVDENTIGVVAILGTTFTGELEPVAEIAAALDELAASGGPDVP
LHVDAASGGFVVPFLHPDLEWDFRVPRVVSINVSGHKYGMTYPGIGFVVWRSKEHLPEDL
VFRVNYLGGDMPTFTLNFSRPGNQVIGQYYNFIRLGVAGYTQIMETLRDTALMLSKQISE
IENMAIITDGSAIPVISFEVTGDPGFTVFDISHELRARGFQVPAYTMPADAEDVAVLRIV
LREGFSRDIAHKLGEDIADVVGYLREGVGRGHTDQAFAH
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtccaatgctccagccgagacactcgcacctgccttcaccggcagactcggt
accgacccgattcctgctctgcgacttcccaagtcggagaccgatccggaggcgacgtac
cagttcatacacgacgagctgatgctcgacggcagctcgcggctcaacctggcgaccttc
gtcaccacgtggatggatccgcaggcgggtcgtctcatggccgagacgttcgacaagaac
atgatcgacaaggacgagtatccggccacggcggagatcgagacccgttgcgtcaacatg
gtcgcggccttgttccacgccgagaacctcgatccggccgatccgtcgtcggccaccggc
gtctcgacgatcggttcgtccgaggccgtcatgctcggcggtctcgcgctcaagtggcgc
tggcgtgaggcccgtagggccgccggcaaggacgcgtcgaagccgaacctggtgctcggc
agcaacgtgcaggtggtgtgggagaagttctgccgctacttcgacgtcgagccgaaatac
ctgccgatggagcccggccgttacgtcatcacccccgagcaggtccgcgaagcggtcgac
gagaacaccatcggcgtcgtcgcgatcctcggcaccaccttcaccggtgaactcgagccg
gtggcggagatcgccgccgcgctcgacgagctcgcggcctccggcggtcccgacgtcccg
ttgcacgtcgacgccgcctccggtggcttcgtggtgcccttcctccatccggacctcgaa
tgggacttccgtgtgccgcgggtcgtgtccatcaacgtcagtggtcacaagtacggcatg
acctatccgggtatcggtttcgtcgtctggcgctcgaaggaacatctgcccgaggacctg
gtcttccgggtcaactacctcggtggcgacatgccgacgttcacgctcaacttctcgcgt
cctggtaaccaggtcatcggccagtactacaacttcatccggctcggtgtcgccgggtac
acgcagatcatggagaccctgcgcgacaccgcgctcatgctgtcgaagcagatctccgag
atcgagaacatggcgatcatcacggacggctccgccatcccggtcatctccttcgaggtg
acgggcgaccccggcttcacggtgttcgacatctcccacgaattgcgggcccgcggattc
caggttccggcctacacgatgccggccgacgcggaggacgtcgcggtcctgcgaatcgtg
cttcgcgagggcttcagccgggacatcgcccacaagctcggtgaagacatcgccgatgta
gtcggatatctccgcgagggtgtcggtcgcggccacaccgaccaggcattcgcacactga
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