Rhodococcus pyridinivorans SB3094: Y013_10960
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Entry
Y013_10960 CDS
T02974
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rpy
Rhodococcus pyridinivorans SB3094
Pathway
rpy00521
Streptomycin biosynthesis
rpy00523
Polyketide sugar unit biosynthesis
rpy00525
Acarbose and validamycin biosynthesis
rpy00541
O-Antigen nucleotide sugar biosynthesis
rpy01100
Metabolic pathways
rpy01110
Biosynthesis of secondary metabolites
rpy01250
Biosynthesis of nucleotide sugars
Module
rpy_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rpy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Y013_10960
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Y013_10960
01055 Biosynthesis of vancomycin group antibiotics
Y013_10960
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Y013_10960
00525 Acarbose and validamycin biosynthesis
Y013_10960
Enzymes [BR:
rpy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Y013_10960
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
adh_short
Motif
Other DBs
NCBI-ProteinID:
AHD21153
UniProt:
V9XEK7
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All DBs
Position
2365752..2366759
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AA seq
335 aa
AA seq
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MRVLVTGGAGFIGANFVHQTVAERPDTQVTVLDKLTYAGNRASLDPVADTITFVEGDIGD
TDLVDRLVADTDLVVHFAAESHNDNSLANPAPFVQTNLVGTFTLLEAVRKYDVRYHHIST
DEVYGDLALDDPARFTEATAYNPSSPYSSTKAGSDLLVRAWVRSFGVRATISNCSNNYGP
YQHVEKFIPRQITNVLTGVRPKLYGTGTNVRDWIHVDDHNSAVWTIIEHGRLGETYLIGA
DGETDNRTVVETVLELCGKGRDEFDFVTDRPGHDLRYAIDATRLRTELGWAPRYRDFREG
LAATIDWYRANEQWWTPQKRATEAAYSRTERVLEI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgcttgtgactggtggtgccggtttcatcggcgcgaacttcgtccatcagacc
gtcgcggaacgacccgacacgcaggtcaccgtgctcgacaagctcacctacgccggcaac
cgcgcctccctcgacccggtcgccgacacgatcaccttcgtcgaaggtgatatcggcgac
accgacctcgtcgaccggctcgtcgccgacaccgatctggtggtgcacttcgccgccgaa
tcccacaacgacaactcgctggcgaaccccgcaccgttcgtgcagaccaatctcgtgggc
accttcacgctgctcgaggccgtccgcaagtacgacgtgcgttatcaccacatctccacc
gacgaggtctacggcgacctcgccctcgacgaccccgcccgcttcaccgaggccaccgcc
tacaacccgtcgagcccctattcgtcgaccaaggccggctcggatctgctggtgcgcgcc
tgggtgcgctcgttcggcgtccgcgcgaccatctccaactgctcgaacaactacggcccg
tatcagcacgtggagaagttcatcccccgccagatcaccaacgtgctcaccggtgtgcgc
cccaagctctacggcaccggcaccaacgtgcgggattggatccacgtcgacgaccacaac
agcgccgtgtggacgatcatcgaacacggccggctcggcgagacctatctgatcggcgcc
gacggggagaccgacaaccgcaccgtcgtcgaaaccgtcctcgagctgtgcggcaagggc
cgtgacgagttcgatttcgtcaccgatcgccccggccacgacctgcgttacgccatcgac
gcgacccgcctgcgcaccgaactgggctgggcgccccgctaccgcgacttccgtgagggc
ctggccgcgaccatcgactggtaccgcgccaacgagcagtggtggacgccacagaaacgg
gccaccgaggccgcctacagccgcaccgagcgcgttcttgagatctaa
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