Rhodococcus qingshengii: C1M55_17420
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Entry
C1M55_17420 CDS
T05315
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
rqi
Rhodococcus qingshengii
Pathway
rqi00250
Alanine, aspartate and glutamate metabolism
rqi00410
beta-Alanine metabolism
rqi00430
Taurine and hypotaurine metabolism
rqi00650
Butanoate metabolism
rqi01100
Metabolic pathways
rqi01110
Biosynthesis of secondary metabolites
rqi01120
Microbial metabolism in diverse environments
rqi02024
Quorum sensing
Module
rqi_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rqi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
C1M55_17420
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
C1M55_17420
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
C1M55_17420
00430 Taurine and hypotaurine metabolism
C1M55_17420
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C1M55_17420
Enzymes [BR:
rqi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
C1M55_17420
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
SAM_1
Motif
Other DBs
NCBI-ProteinID:
AUS32709
UniProt:
A0A2A5JAU0
LinkDB
All DBs
Position
1:3764084..3765475
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AA seq
463 aa
AA seq
DB search
MPEPRRSDHTDYVAVNPIFSRPGEDSVASKYTLEPDGMLPETAYQIVHDETMLDGNARLN
LATFVSTWMDDHATKLYAESFDKNMIDKDEYPQTAAIETYCWRILADLWHSPSPKDAIGT
STIGSSEACMLGGLAMKRRWQHARKAAGKSTEKPNLIMSSAVQVCWEKFCNYWDVEARYV
PISEEHRTLDGHDLDKYVDENTIGVVAIMGVTYTGMYEPVLEISKALDEIQAKTGLDVPI
HVDGASGAMIAPFLQPELEWDFRLPRVHSINTSAHKYGLVYPGLGWVVWRSQDLLPDDLV
FKVSYLGGSMPTFALNFSRPGAQVILQFYLFLRLGHDGYRAIQQSSQDVAKFLAEGIGKL
DAFELWNDGSDIPVFAWRLAEGHTSNWTLYDLSDRLRGKGWLVPAYPMPDDLADLTVQRI
VVRNGLSMDLAANLLRIIEEETAFLDELDSPMPRPRVTEGFHH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacccagaaggtcagatcacaccgattacgtagccgtcaatccgatcttctcg
aggcctggcgaggattcggttgcatcgaagtacacactcgaacccgatggcatgcttccc
gagaccgcgtatcagatcgtccacgacgaaacgatgctcgacggcaatgcgcggctcaat
ctcgcgacgttcgtcagcacgtggatggacgatcacgccaccaaactgtatgccgagtcg
ttcgacaagaacatgatcgacaaggacgagtatccgcagaccgccgcgatcgaaacctat
tgctggcgcatccttgccgatctctggcactcaccctcccccaaggacgcaatcggcacc
tcgacgatcggttcgtccgaagcctgcatgctcggcggcctggcgatgaaacgacgctgg
cagcacgcacgaaaagccgcgggcaagtcgaccgaaaagccaaatctcatcatgagttcc
gcggtccaggtgtgctgggagaagttctgcaactactgggacgtcgaagcgcgttacgtg
ccgatcagcgaggaacaccgcaccctcgacggtcacgatctggacaagtacgtcgacgag
aacaccatcggcgtcgtcgcgatcatgggcgtcacctacaccgggatgtacgagccggtc
ctggaaatctcgaaggcactcgatgagatccaggcgaagacgggactcgacgtccccatc
cacgtcgacggcgcttccggtgcgatgatcgcaccgttccttcagcccgaactcgaatgg
gatttccgactaccgcgcgtccactccatcaacacctcggcgcacaagtacgggctcgtc
tatcccggcctcggatgggtggtctggcgatcgcaggatctacttcccgacgacctcgtc
ttcaaggtgagctacctcggcggcagtatgccgaccttcgcactgaacttctcgcgcccc
ggcgctcaggtgatcctgcagttctacttgttcctgcgtctcggccacgacggctatcgc
gcaatccagcagtcctcccaggacgtggcgaaatttctcgccgaagggatcgggaaactc
gacgcgttcgaactgtggaacgacggttccgacatcccggtcttcgcgtggcgcctcgcc
gaggggcacacgtccaactggacgctgtacgacctctcggaccggttgcgaggcaagggc
tggttggtgccggcctaccccatgccggacgatctcgcggatctgacagtgcagcgcatc
gtggttcgtaacggactgagcatggacctggcggccaatctgctgcgcatcatcgaagag
gaaaccgcgttcctcgacgaactggacagcccgatgccgcggccgcgcgtcaccgaggga
ttccatcactga
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