Rickettsia rickettsii Colombia: RPL_03005
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Entry
RPL_03005 CDS
T01722
Name
(GenBank) phospholipid-lipopolysaccharide ABC transporter
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
rrc
Rickettsia rickettsii Colombia
Pathway
rrc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rrc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RPL_03005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rrc02000
]
RPL_03005
Enzymes [BR:
rrc01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
RPL_03005
Transporters [BR:
rrc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RPL_03005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
nSTAND3
ABC_ATPase
RsgA_GTPase
AAA_21
AAA_22
Treslin_N
Motif
Other DBs
NCBI-ProteinID:
AFB23485
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Position
528012..529775
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AA seq
587 aa
AA seq
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MNNNNLNDNYTAADVIKRLIKDHIKPYANKIYFSIFCMVVAALCTAVIVHAARPIIDKVF
LTHDKKMLIIMPIVLTVTFVIKGISEYYQNYLIKFVGQRVLNDLQIKMYEHLLFADISFI
QNQSSGRLISRFTNDISLMRGAVSNLLVGCAKHFLTVVCLIATMFHLEPLLSCVVFLVFP
LAVYPVQRMGRKIRRIFAQSQEELGHYTSRLDETFQSIKIIKSFVGEQIESNRASLIINN
ILEFYKKTSKLDAMVAPIMEGLSGLAVGGMVWYGGNLVLEGKSTPGALFAFLASFAAAYR
PFKSLVSLNINLQEGIAAAKRVFSILDTEPLIKDHADAKDVDLYNPQITFEKLALRFESK
IAIKYIDLRLEPHKIIAFVGRSGSAKTSLSNLLVRFYDPNEGRILINNHDIKDIKLTSLR
GQISLVTQDTHLFDTSVAENIAYGQDNATREEIIRAAKYADAHEFIMHLPNGYDTQIGGQ
GTTLSGGQRQRLSIARAFLKDAPILIWDEATSSLDQASEQKILESLKKLRQGKTTLIITH
RLSSITDLDNIIVMKNGEICEQGTHTQLLKNKDEYYRLYNKELRENG
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaataatttaaatgataactacacagccgcagatgttataaaaaggctgata
aaagatcatattaaaccttacgcaaataaaatatatttttcgatattttgtatggttgtt
gcagcactttgtacggcagtgatcgtacatgcggctagacctattattgataaggttttt
ttaacgcatgataagaaaatgcttataataatgcccatagtgcttactgtaacttttgtt
ataaaaggaatttcagagtattatcagaattatctaataaaatttgttgggcagagggta
ctaaacgatttacagataaaaatgtatgagcatttgttatttgccgatatttcttttatt
caaaaccaatcttcaggacgtttaatatctcgttttactaatgatatttctttgatgcgt
ggagctgtttctaacttacttgtcggatgtgctaaacacttcctaactgtagtatgttta
atagcaacaatgtttcatttagaaccgctattatcttgcgtagtttttcttgttttccct
ttagctgtttatccggtgcaaaggatgggtagaaagataagaagaatatttgcacagtca
caagaagagcttgggcattatacctctcggcttgatgaaacatttcagtcaattaagatt
attaaatcttttgtaggcgaacaaatagaaagtaatagagcatcgttgattattaataat
attttagagttctacaaaaaaacatctaagctagatgcgatggttgcaccgattatggag
ggtttaagcggtcttgcagttggagggatggtatggtatggaggtaatctagtcctggag
gggaaaagtacgccaggggctctttttgcttttttggcttcttttgcagcggcttataga
ccgtttaaaagtttggtatcgttaaatattaatttgcaagaaggaatagcagcagctaag
agggtatttagtattttggataccgagcctcttattaaagatcatgcagatgctaaagac
gtagatttatataatccacaaattacttttgaaaaattagctttaaggtttgagagtaaa
atagctataaaatatatagatttaaggctagagcctcataaaattattgcgtttgtcggg
cgttcaggtagtgctaagacttcgcttagtaatttattagtgcgtttttatgatccaaat
gaaggaagaattttaattaataatcatgatattaaagatattaagcttacttcacttaga
ggtcagatttccttagttactcaagatactcatttatttgatacaagcgttgcagaaaat
atagcatacggtcaggacaacgctacaagagaagaaataattagagcagcaaaatatgcc
gatgctcatgagtttattatgcatctgccgaatggttacgacacgcagataggggggcag
gggacgactctttcaggcggtcagcgtcagcgtttatctattgctagagctttcttaaaa
gatgcccctattttaatttgggatgaagcaacaagcagcttagaccaagcttccgaacag
aaaattctagaatcgttaaagaaattacgccaaggaaaaaccactttaattattacgcat
cgtttaagcagtattaccgatcttgataatattatcgtcatgaaaaacggtgagatttgt
gaacaaggaactcatacacaattgcttaagaataaagatgaatattataggttgtataat
aaggagttaagagaaaatggttga
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