Rhodospirillum rubrum F11: F11_05610
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Entry
F11_05610 CDS
T02006
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rrf
Rhodospirillum rubrum F11
Pathway
rrf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F11_05610 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrf03400
]
F11_05610 (ruvB)
Enzymes [BR:
rrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F11_05610 (ruvB)
DNA repair and recombination proteins [BR:
rrf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F11_05610 (ruvB)
RecFOR pathway proteins
F11_05610 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_22
AAA_16
AAA_33
nSTAND3
AAA_2
TsaE
NB-ARC
Rad17
NTPase_1
RNA_helicase
AAA_18
AAA_17
NACHT
AAA_14
AAA_28
Parvo_NS1
Bac_DnaA
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AEO47592
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All DBs
Position
1278609..1279661
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AA seq
350 aa
AA seq
DB search
MAGHEEEDERLISGRRREGEVDAALRPQSLADFVGQRQTRENLGVFVQAARARGEAMDHV
LFHGPPGLGKTTLAQIVARELGVGFRGTSGPMIVKAGDLAAILTNLEPRDVLFIDEIHRL
NPAIEEVLYPAMEDFQLDLIIGEGPAARSVRIDLPPFTLVGATTRSGLLTTPLRDRFGIP
LRLDFYETDELVQIVTRGSRLLGMALTDEGAREVARRSRGTPRVAGRLLRRVRDFAAVAG
RSPVDAFIADAALNRLEVDGRGLDAMDRRYLSRMADHYGGGPVGVDTLAAALAEERDTVE
DVIEPYLIQQGFIKRTPRGRMLTAIAWTHLGLTPPAETPPVQPDLWSDAP
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggccgggcacgaggaggaagatgagcgcctgatctcggggcgccgccgcgagggcgag
gtcgatgcggccctgcgcccgcagtcgctggccgatttcgtcggtcagcgccagacccgt
gaaaacctgggcgttttcgttcaggccgcccgggcgcgcggcgaggcgatggatcacgtg
ctgttccatggtccgccgggcctggggaaaaccacgctcgcccagatcgtggcgcgcgag
cttggcgtggggtttcgcggcaccagtgggccgatgatcgtcaaggccggcgacctcgcg
gcgatcttgaccaatctcgagccgcgcgatgtgctgttcatcgacgaaatccaccgcctt
aatcccgccatagaggaagttttgtatccggcgatggaggacttccagttggacctcatc
atcggtgaggggccggcggcgcggagcgtgcggatcgacctgccgcccttcaccctggtt
ggggcgacgacccggtcgggcctcctgacaacgccgctgcgcgaccgctttggcattccg
ctgcgactcgacttctatgaaaccgatgaattggtccagatcgtgacccggggttcccgg
cttcttggcatggctttgaccgacgagggcgcccgcgaagtggcgcgacgatcgcggggc
acgccgcgggtggccggtcggctgctgcgccgggtgcgcgatttcgccgccgtcgccggg
cgttcgcccgttgacgccttcatcgccgatgccgcgctcaaccgcctggaggtggacggg
cgcgggcttgatgccatggaccggcgctatctgtcgcgcatggccgaccattatggcggc
gggccggtcggggtcgataccctggccgccgccctggccgaggaacgcgatacggtggaa
gacgtgatcgagccctatttgatccagcagggcttcatcaagcggacgccgcgcggccgg
atgctgacggcgatcgcctggacccatcttgggctgacaccgccggccgagacgccgccg
gttcagcccgacctgtggtccgacgccccatga
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