Rhodospirillum rubrum F11: F11_09505
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Entry
F11_09505 CDS
T02006
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
rrf
Rhodospirillum rubrum F11
Pathway
rrf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F11_09505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrf03400
]
F11_09505
DNA repair and recombination proteins [BR:
rrf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
F11_09505
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
F11_09505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AEO48367
LinkDB
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Position
complement(2148828..2149586)
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AA seq
252 aa
AA seq
DB search
MIEWSDRGIVLAARPHGEDGVIVSLLSAGHGRHSGIVRGGRGKRLRAALQPGSLVQATWK
ARLEDHLGSLVVELLAGVAGGLLDDRDRLAALAAACALAETVLPERAPQADVYDATLALL
DALAEGGEGTPLVWAGAFVRWEIGLLAALGFGLDLSCCAVSGECGDLAYVSPRSGRAVGR
EAGAPWQARLLALPAFLLSPAEVPANAQAVGDGLRLSGYFLEGHVLAPQGRGLPASRQRF
VERLRRWSAADR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaatggagcgatcggggaatcgtgctggccgcccggccccatggcgaggatggg
gtgatcgtcagcctgctgagcgccggccatgggcgccattccggcatcgtccgcggcgga
cgcggcaagcggctgcgcgccgcccttcagccgggatccctggttcaggccacgtggaag
gcccgcctggaagatcatctgggcagccttgtcgtcgagcttctggccggggtggccggg
ggattgctggatgatcgcgaccggctggccgccctggcggcggcctgtgccctggccgaa
acggtcttgcccgaacgcgccccccaggccgatgtctatgacgcgaccctggcgctgctc
gacgccctggccgagggcggggagggcacccccctggtctgggcgggggccttcgtgcgc
tgggaaatcgggctgctcgccgctttgggcttcgggcttgacctgtcatgctgcgccgtg
agcggggagtgcggcgatctcgcctatgtctcgccgcgcagcggccgggcggtcgggcgg
gaggcgggcgcgccgtggcaggcgcggctgcttgccctgccggcctttctgctgtcgccc
gccgaggttccggcgaacgcccaggcggttggtgacggcctgcgccttagcggctatttc
ctggaggggcatgttctggcgccccaggggcggggattgcccgccagccggcagaggttt
gtcgaacggttgcgccggtggtcagcggcggaccggtga
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